ArticlePloS one2015
Association of Agronomic Traits with SNP Markers in Durum Wheat (Triticum turgidum L. durum (Desf.)).
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
17 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Pooled it
- Genome-Wide Association Study of Leaf Rust and Stem Rust Seedling and Adult Resistances in Tetraploid Wheat Accessions Harvested in Kazakhstan.Plants (Basel, Switzerland) · 2022Article
- Regions of Chromosome 2A of Bread Wheat (Plants (Basel, Switzerland) · 2021Article
- Linkage disequilibrium patterns, population structure and diversity analysis in a worldwide durum wheat collection including Argentinian genotypes.BMC genomics · 2021Article
- Molecular Mapping and Genomics of Grain Yield in Durum Wheat: A Review.International journal of molecular sciences · 2020Review
- Genome-wide association and epistatic interactions of flowering time in soybean cultivar.PloS one · 2020Article
- SNP-based association study of kernel architecture in a worldwide collection of durum wheat germplasm.PloS one · 2020Article
- Genetic analysis of threshability and other spike traits in the evolution of cultivated emmer to fully domesticated durum wheat.Molecular genetics and genomics : MGG · 2019Article
- Development of molecular markers for invasive alien plants in Korea: a case study of a toxic weed,PeerJ · 2019Article
- Wheat genetic resources in the post-genomics era: promise and challenges.Annals of botany · 2018Review
- Multi-Locus Genome-Wide Association Studies for 14 Main Agronomic Traits in Barley.Frontiers in plant science · 2018Article
- Environmental and Genetic Variation for Yield-Related Traits of Durum Wheat as Affected by Development.Frontiers in plant science · 2018Article
- Associations of canopy leaf traits with SNP markers in durum wheat (Triticum turgidum L. durum (Desf.)).PloS one · 2018Article
- Haplotype Loci Under Selection in Canadian Durum Wheat Germplasm Over 60 Years of Breeding: Association With Grain Yield, Quality Traits, Protein Loss, and Plant Height.Frontiers in plant science · 2018Article
- SNP-based association analysis for seedling traits in durum wheat (Breeding science · 2017Article
- Genome-Wide Single-Nucleotide Polymorphisms in CMS and Restorer Lines Discovered by Genotyping Using Sequencing and Association with Marker-Combining Ability for 12 Yield-Related Traits inFrontiers in plant science · 2017Article
- Solar Radiation-Associated Adaptive SNP Genetic Differentiation in Wild Emmer Wheat,Frontiers in plant science · 2017Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
10 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Association mapping is a powerful approach to detect associations between traits of interest and genetic markers based on linkage disequilibrium (LD) in molecular plant breeding. In this study, 150 accessions of worldwide originated durum wheat germplasm (Triticum turgidum spp. durum) were genotyped using 1,366 SNP markers. The extent of LD on each chromosome was evaluated. Association of single nucleotide polymorphisms (SNP) markers with ten agronomic traits measured in four consecutive years was analyzed under a mix linear model (MLM). Two hundred and one significant association pairs were detected in the four years. Several markers were associated with one trait, and also some markers were associated with multiple traits. Some of the associated markers were in agreement with previous quantitative trait loci (QTL) analyses. The function and homology analyses of the corresponding ESTs of some SNP markers could explain many of the associations for plant height, length of main spike, number of spikelets on main spike, grain number per plant, and 1000-grain weight, etc. The SNP associations for the observed traits are generally clustered in specific chromosome regions of the wheat genome, mainly in 2A, 5A, 6A, 7A, 1B, and 6B chromosomes. This study demonstrates that association mapping can complement and enhance previous QTL analyses and provide additional information for marker-assisted selection.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.