Evidence map›Paper›PMID 26109550›Full record

ArticlePathogens and disease2015

Chlamydia trachomatis virulence factor CT135 is stable in vivo but highly polymorphic in vitro.

Christine Bonner, Harlan D Caldwell, John H Carlson, Morag R Graham, Laszlo Kari, Gail L Sturdevant, Shaun Tyler, Adrian Zetner, Grant McClarty

Open access · bronzeAbstract read
In one paragraph

Article in Pathogens and disease, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. TheInfection and immunity · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The multiple functions of the numerousMicrobial cell (Graz, Austria) · 2019
    Review
  10. Transcriptional Expression of theMicroorganisms · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. A Primer on Infectious Disease Bacterial Genomics.Clinical microbiology reviews · 2016
    Review
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Christine BonnerNational Microbiology Laboratory, Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB R3E 3R2, Canada.
Harlan D CaldwellLaboratory of Intracellular Parasites, Rocky Mountain Laboratories, NIH, 903 South 4 Street, Hamilton, MT 59840, USA.
John H CarlsonLaboratory of Intracellular Parasites, Rocky Mountain Laboratories, NIH, 903 South 4 Street, Hamilton, MT 59840, USA.
Morag R GrahamNational Microbiology Laboratory, Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB R3E 3R2, Canada.
Laszlo KariLaboratory of Intracellular Parasites, Rocky Mountain Laboratories, NIH, 903 South 4 Street, Hamilton, MT 59840, USA.
Gail L SturdevantLaboratory of Intracellular Parasites, Rocky Mountain Laboratories, NIH, 903 South 4 Street, Hamilton, MT 59840, USA.
Shaun TylerNational Microbiology Laboratory, Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB R3E 3R2, Canada.
Adrian ZetnerNational Microbiology Laboratory, Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB R3E 3R2, Canada.
Grant McClartyNational Microbiology Laboratory, Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB R3E 3R2, Canada Department of Medical Microbiology, 745 Bannatyne Avenue, Winnipeg, MB R3E 0W9, Canada Grant.McClarty@umanitoba.ca.
Public Health Agency of Canada · CA

Funding

Chlamydial Immunity and Vaccine DevelopmentZIAAI000672 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI CALDWELL, HARLAN D · 2009 to 2016
$6.8M
Intramural NIH HHS
6 · The paper itself

Abstract

Chlamydia trachomatis is an important human pathogen causing both ocular and sexually transmitted disease. Recently, we identified CT135 as an important virulence determinant in a mouse infection model. Results from CEL 1 digestion assays and sequencing analyses indicated that CT135 was much more polymorphic in high in vitro passage reference serovars than it was in clinical strains that had undergone limited passaging. Herein, we used targeted next-generation sequencing of the CT134-135 locus, from reference strains and clinical isolates, enabling accurate discovery of single nucleotide polymorphisms and other population genetic variations. Our results indicate that CT134 is stable in all C. trachomatis serovars examined. In contrast, CT135 is highly polymorphic in high-passaged reference ocular and non-LGV genital serovars, with the majority of the mutations resulting in gene disruption. In low-passaged ocular clinical isolates, CT135 was frequently disrupted, whereas in genital clinical isolates CT135 was intact in almost all instances. When a serovar K isolate, with an intact CT134 and CT135, was subjected to serial passage in vitro CT134 remained invariable, while numerous gene interrupting mutations rapidly accumulated in CT135. Collectively, our data indicate that, for genital serovars, CT135 is under strong positive selection in vivo, and negative selection in vitro.

Indexed as

Genetic VariationGenomic InstabilityAnimalsChlamydia InfectionsChlamydia trachomatisDNA, BacterialGene DeletionHigh-Throughput Nucleotide SequencingHumansMiceMutationSelection, GeneticSequence Analysis, DNASerial PassageVirulence FactorsDNA, BacterialVirulence Factorschlamydia trachomatisCT135deep sequencinggenomicssingle nucleotide polymorphismvirulence factor

Identifiers

PMID26109550
PMCPMC4852218
OpenAlexW1919886276

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.