Evidence map›Paper›PMID 26109219›Full record

ArticleEnvironmental science and pollution research international2015

Characterization of the molecular degradation mechanism of diphenyl ethers by Cupriavidus sp. WS.

Sheng Wang, Naling Bai, Bing Wang, Zhuo Feng, William C Hutchins, Ching-Hong Yang, Yuhua Zhao

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Article in Environmental science and pollution research international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Sheng WangInstitute of Microbiology, College of Life Sciences, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China.
Naling BaiInstitute of Microbiology, College of Life Sciences, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China.
Bing WangHangzhou Center for Disease Control and Prevention, Hangzhou, 310021, Zhejiang, People's Republic of China.
Zhuo FengInstitute of Microbiology, College of Life Sciences, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China.
William C HutchinsDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Ching-Hong YangDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA. chyang@uwm.edu.
Yuhua ZhaoInstitute of Microbiology, College of Life Sciences, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China. yhzhao225@zju.edu.cn.
Zhejiang University · CNUniversity of Wisconsin–Milwaukee · USHangzhou Center for Disease Control and Prevention · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Commonly used flame retardants, such as polybrominated diphenyl ethers, are extremely persistent in the environment, causing serious environmental risks. Certain strains of bacteria are able to degrade several low brominated congeners of PBDEs aerobically. However, the aerobic degradation pathway is not yet well understood, particularly at the genetic level. In this study, we isolated Cupriavidus sp. WS from the environment that could degrade diphenyl ether (DE), 4-bromodiphenyl ether, and 4,4'-bromodiphenyl ether. DE was completely degraded in 6 days without any detectable end-product. Using transposon mutagenesis, several DE degradation-deficient mutants were obtained. Knocking out bphA1, bphA2, and bphA3 eliminated the ability of the Cupriavidus sp. WS bacterium to degrade DE, indicating that the bph genes play a crucial role in DE degradation by this strain. The specific roles of bphA, bphB, and bphC were identified by systematically expressing these genes in Escherichia coli. The dihydrodiol product of BphA was dehydrogenated into 2,3-dihydroxydiphenyl ether by BphB. 2,3-Dihydroxydiphenyl ether was then decomposed into phenol and 2-pyrone-6-carboxylic acid by BphC. Thus, BphA, BphB, and BphC act sequentially in the aerobic degradation of DE, 4-bromodiphenyl ether, and 4,4'-dibromodiphenyl ether by the Cupriavidus sp. WS bacterium.

Indexed as

Biodegradation, EnvironmentalChromatography, High Pressure LiquidCupriavidusEnvironmental PollutantsEscherichia coliFlame RetardantsGas Chromatography-Mass SpectrometryHalogenated Diphenyl EthersPyronesSpecies Specificity2-pyrone-6-carboxylic acidEnvironmental PollutantsFlame RetardantsHalogenated Diphenyl EthersPyronesBiodegradationBiphenyl-2,3-diol 1,2-dioxygenaseBiphenyl 2,3-dioxygenaseCis-2,3-dihydrobiphenyl-2,3-diol dehydrogenaseMetabolitesPolybrominated diphenyl ether

Identifiers

PMID26109219
OpenAlexW770088690

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.