Evidence map›Paper›PMID 26108885›Full record

ArticleScientific reports2015

An Alternative Phosphorylation Switch in Integrin β2 (CD18) Tail for Dok1 Binding.

Sebanti Gupta, Joel Chia-Yeong Chit, Chen Feng, Anirban Bhunia, Suet-Mien Tan, Surajit Bhattacharjya

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sebanti GuptaSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551.
Joel Chia-Yeong ChitSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551.
Chen FengSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551.
Anirban BhuniaSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551.
Suet-Mien TanSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551.
Surajit BhattacharjyaSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551.
Nanyang Technological University · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Integrins are involved in cell migration and adhesion. A large number of proteins interact with the cytoplasmic tails of integrins. Dok1 is a negative regulator of integrin activation and it binds to the phosphorylated membrane proximal NxxY motif in a number of integrin β tails. The β tail of the β2 integrins contains a non-phosphorylatable NxxF motif. Hence it is unclear how Dok1 associates with the β2 integrins. We showed in this study using NMR and cell based analyses that residues Ser745 and Ser756 in the integrin β2 tail, which are adjacent to the NxxF motif, are required for Dok1 interaction. NMR analyses detected significant chemical shift changes and higher affinity interactions between Dok1 phospho-tyrosine binding (PTB) domain and integrin β2 tail peptide containing pSer756 compared to pSer745. The phosphorylated β2 peptide occupies the canonical ligand binding pocket of Dok1 based on the docked structure of the β2 tail-Dok1 PTB complex. Taken together, our data suggest an alternate phosphorylation switch in β2 integrins that regulates Dok1 binding. This could be important for cells of the immune system and their functions.

Indexed as

Amino Acid MotifsAmino Acid SequenceBinding SitesCD18 AntigensDNA-Binding ProteinsFluorescence Resonance Energy TransferHumansImmunoblottingK562 CellsKineticsLuminescent ProteinsMagnetic Resonance SpectroscopyModels, MolecularMolecular Sequence DataPeptidesPhosphoproteinsCD18 AntigensDNA-Binding ProteinsDOK1 protein, humanLuminescent ProteinsPeptidesPhosphoproteinsRNA-Binding ProteinsSerine

Identifiers

PMID26108885
PMCPMC4479986
OpenAlexW2096782582

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.