Evidence map›Paper›PMID 26108880›Full record

ArticleScientific reports2015

Identification of cytokine-induced modulation of microRNA expression and secretion as measured by a novel microRNA specific qPCR assay.

Vladimir Benes, Paul Collier, Claus Kordes, Jens Stolte, Tobias Rausch, Martina U Muckentaler, Dieter Häussinger, Mirco Castoldi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 61 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Vladimir BenesEuropean Molecular Biology Laboratory, Genomics Core Facility, D 69117 Heidelberg, Germany.
Paul CollierEuropean Molecular Biology Laboratory, Genomics Core Facility, D 69117 Heidelberg, Germany.
Claus KordesDepartment of Gastroenterology, Hepatology and Infectious Diseases, Heinrich Heine University, D 40225 Düsseldorf, Germany.
Jens StolteRIKEN 1 230 0045, 1 Chome-7-22 Suehirochō, Tsurumi-ku, Yokohama-shi, Kanagawa-ken 230-0045, Japan.
Tobias RauschEuropean Molecular Biology Laboratory, Genomics Core Facility, D 69117 Heidelberg, Germany.
Martina U Muckentaler1] Department of Pediatric Oncology, Hematology and Immunology University of Heidelberg, D 69120 Heidelberg, Germany [2] Molecular Medicine Partnership Unit, University of Heidelberg, D 69120 Heidelberg, Germany.
Dieter HäussingerDepartment of Gastroenterology, Hepatology and Infectious Diseases, Heinrich Heine University, D 40225 Düsseldorf, Germany.
Mirco CastoldiDepartment of Gastroenterology, Hepatology and Infectious Diseases, Heinrich Heine University, D 40225 Düsseldorf, Germany.
European Molecular Biology Laboratory · DEHeinrich Heine University Düsseldorf · DEHeidelberg University · DERIKEN · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

microRNAs are an abundant class of small non-coding RNAs that control gene expression post-transcriptionally. Importantly, microRNA activity participates in the regulation of cellular processes and is a potentially valuable source of biomarkers in the diagnosis and prognosis of human diseases. Here we introduce miQPCR, an innovative method to quantify microRNAs expression by using Real-Time PCR. miQPCR exploits T4 RNA ligase activities to extend uniformly microRNAs' 3'-ends by addition of a linker-adapter. The adapter is then used as 'anchor' to prime cDNA synthesis and throughout qPCR to amplify specifically target amplicons. miQPCR is an open, adaptable and cost-effective procedure, which offers the following advantages; i) universal elongation and reverse transcription of all microRNAs; ii) Tm-adjustment of microRNA-specific primers; iii) high sensitivity and specificity in discriminating among closely related sequences and; iv) suitable for the analysis of cellular and cell-free circulating microRNAs. Analysis of cellular and cell-free circulating microRNAs secreted by rat primary hepatocytes stimulated with cytokines and growth factors identifies for the first time a widespread modulation of both microRNAs expression and secretion. Altogether, our findings suggest that the pleiotropic activity of humoral factors on microRNAs may extensively affect liver function in response to injury and regeneration.

Indexed as

AnimalsBase SequenceCells, CulturedCytokinesDNA, ComplementaryGene ExpressionGene Expression ProfilingHepatocytesMaleMicroRNAsPolymerase Chain ReactionPrimary Cell CultureRats, WistarReal-Time Polymerase Chain ReactionReproducibility of ResultsReverse Transcriptase Polymerase Chain ReactionCytokinesDNA, ComplementaryMicroRNAs

Identifiers

PMID26108880
PMCPMC4480321
OpenAlexW2257584443

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.