Evidence map›Paper›PMID 26108676›Full record

Observational studyCancer2015

Folate-mediated one-carbon metabolism genes and interactions with nutritional factors on colorectal cancer risk: Women's Health Initiative Observational Study.

Ting-Yuan David Cheng, Karen W Makar, Marian L Neuhouser, Joshua W Miller, Xiaoling Song, Elissa C Brown, Shirley A A Beresford, Yingye Zheng, Elizabeth M Poole, Rachel L Galbraith and 8 more

Open access · bronzeAbstract readObservational Study
In one paragraph

Observational study in Cancer, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 2 pooled it
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 2 syntheses or guidelines pooled it, 41 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. PRDM Proteins Orchestrate Colorectal Cancer Tumorigenesis.International journal of molecular sciences · 2026
    Review
  5. Review
  6. Genome-wide interaction analysis of folate for colorectal cancer risk.The American journal of clinical nutrition · 2023
    Article
  7. Review
  8. Observational
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  10. Review
  11. Article
  12. Article
  13. Observational
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 11 institutions in 2 countries.

Ting-Yuan David ChengPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Karen W MakarPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Marian L NeuhouserPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Joshua W MillerDepartment of Nutritional Sciences, Rutgers University, New Brunswick, New Jersey.
Xiaoling SongPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Elissa C BrownPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Shirley A A BeresfordPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Yingye ZhengPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Elizabeth M PooleDepartment of Medicine, Channing Division of Network Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.
Rachel L GalbraithPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
David J DugganTranslational Genomics Research Institute, Phoenix, Arizona.
Nina HabermannDepartment of Preventive Oncology, National Center for Tumor Diseases and German Cancer Research Center, Heidelberg, Germany.
Lynn B BaileyDepartment of Foods and Nutrition, University of Georgia, Athens, Georgia.
David R ManevalDepartment of Food Science and Human Nutrition, University of Florida, Gainesville, Florida.
Marie A CaudillDivision of Nutritional Sciences, Cornell University, Ithaca, New York.
Adetunji T ToriolaDepartment of Surgery, Division of Public Health Sciences and Siteman Cancer Center, Washington University School of Medicine, St. Louis, Missouri.
Ralph GreenDepartment of Pathology and Laboratory Medicine, University of California Davis, Davis, California.
Cornelia M UlrichPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Fred Hutch Cancer Center · USGerman Cancer Research Center · DEBrigham and Women's Hospital · USCornell University · USRoswell Park Comprehensive Cancer Center · USRutgers, The State University of New Jersey · USTranslational Genomics Research Institute · USUniversity of California, Davis · USUniversity of Florida · USUniversity of Georgia · USWashington University in St. Louis · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
A Prospective Study of Colorectal Cancer: One-Carbon Metabolism and InflammationR01CA120523 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI ULRICH, CORNELIA M · 2008 to 2012
$3.0M
WOMENS HEALTH INITIATIVE-N01WH22110N01WH022110 · WH · FRED HUTCHINSON CANCER RESEARCH CENTER · PI ROSS, PRENTICE · 1992 to 2006
$1.2M
NCI NIH HHS P30 CA015704NCI NIH HHS R01 CA120523NHLBI NIH HHS HHSN268201100001INHLBI NIH HHS HHSN268201100002INHLBI NIH HHS HHSN268201100004INHLBI NIH HHS HHSN268201100046CNIA NIH HHS HHSN271201100004CPHS HHS HSN268201100003CWHI NIH HHS HHSN268201100001CWHI NIH HHS HHSN268201100002CWHI NIH HHS HHSN268201100004CWHI NIH HHS N01 WH022110
6 · The paper itself

Abstract

backgroundInvestigations of folate-mediated one-carbon metabolism (FOCM) genes and gene-nutrient interactions with respect to colorectal cancer (CRC) risk are limited to candidate polymorphisms and dietary folate. This study comprehensively investigated associations between genetic variants in FOCM and CRC risk and whether the FOCM nutrient status modified these associations.

methodsTwo hundred eighty-eight candidate and tagging single-nucleotide polymorphisms (SNPs) in 30 FOCM genes were genotyped for 821 incident CRC case-control matched pairs in the Women's Health Initiative Observational Study cohort. FOCM biomarkers (red blood cell [RBC] folate, plasma folate, pyridoxal-5'-phosphate [PLP], vitamin B12, and homocysteine) and self-reported alcohol consumption were measured at the baseline. Conditional logistic regression was implemented; effect modification was examined on the basis of known enzyme-nutrient relations.

resultsStatistically significant associations were observed between CRC risk and functionally defined candidate SNPs of methylenetetrahydrofolate dehydrogenase 1 (MTHFD1; K134R), 5-methyltetrahydrofolate-homocysteine methyltransferase reductase (MTRR; P450R), and PR domain containing 2 with ZNF domain (PRDM2; S450N) and a literature candidate SNP of thymidylate synthase (TYMS; g.676789A>T; nominal P < .05). In addition, suggestive associations were noted for tagging SNPs in cystathionine-β-synthase (CBS), dihydrofolate reductase (DHFR), DNA (cytosine-5-)-methyltransferase 3β (DNMT3B), methionine adenosyltransferase I α (MAT1A), MTHFD1, and MTRR (nominal P < .05; adjusted P, not significant). Significant interactions between nutrient biomarkers and candidate polymorphisms were observed for 1) plasma/RBC folate and folate hydrolase 1 (FOLH1), paraoxonase 1 (PON1), transcobalamin II (TCN2), DNMT1, and DNMT3B; 2) plasma PLP and TYMS TS3; 3) plasma B12 and betaine-homocysteine S-methyltransferase 2 (BHMT2); and 4) homocysteine and methylenetetrahydrofolate reductase (MTHFR) and alanyl-transfer RNA synthetase (AARS).

conclusionsGenetic variants in FOCM genes are associated with CRC risk among postmenopausal women. FOCM nutrients continue to emerge as effect modifiers of genetic influences on CRC risk.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAgedBiomarkersCase-Control StudiesColorectal NeoplasmsDNA-Binding ProteinsFemaleFerredoxin-NADP ReductaseFolic AcidHistone-Lysine N-MethyltransferaseHumansLogistic ModelsMethylenetetrahydrofolate Dehydrogenase (NADP)Middle AgedMinor Histocompatibility AntigensBiomarkersDNA-Binding ProteinsFerredoxin-NADP ReductaseFolic AcidHistone-Lysine N-Methyltransferasemethionine synthase reductaseMethylenetetrahydrofolate Dehydrogenase (NADP)Minor Histocompatibility AntigensMTHFD1 protein, humanNuclear ProteinsPRDM2 protein, humanTranscription FactorsVitamin B Complexbiomarkercolorectal cancergene-nutrient interactionone-carbon metabolismpostmenopausal women

Identifiers

PMID26108676
PMCPMC4592375
OpenAlexW1589003746

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.