Evidence map›Paper›PMID 26108490›Full record

ArticleGenome biology and evolution2015

Selfish Mitochondrial DNA Proliferates and Diversifies in Small, but not Large, Experimental Populations of Caenorhabditis briggsae.

Wendy S Phillips, Anna L Coleman-Hulbert, Emily S Weiss, Dana K Howe, Sita Ping, Riana I Wernick, Suzanne Estes, Dee R Denver

Abstract read
In one paragraph

Article in Genome biology and evolution, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Stochastic survival of the densest and mitochondrial DNA clonal expansion in aging.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Review
  11. Review
  12. The conflict within: origin, proliferation and persistence of a spontaneously arising selfish mitochondrial genome.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article
  13. Disentangling the intertwined roles of mutation, selection and drift in the mitochondrial genome.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  14. Intracellular quality control of mitochondrial DNA: evidence and limitations.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  15. Article
  16. Article
  17. Article
  18. Selfish Mitonuclear Conflict.Current biology : CB · 2019
    Review
  19. Article
  20. Comparative mitochondrial genomics reveals a possible role of a recent duplication of NADH dehydrogenase subunit 5 in gene regulation.DNA research : an international journal for rapid publication of reports on genes and genomes · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Wendy S PhillipsDepartment of Integrative Biology, Oregon State University.
Anna L Coleman-HulbertDepartment of Biology, Portland State University.
Emily S WeissDepartment of Integrative Biology, Oregon State University.
Dana K HoweDepartment of Integrative Biology, Oregon State University.
Sita PingDepartment of Integrative Biology, Oregon State University.
Riana I WernickDepartment of Integrative Biology, Oregon State University.
Suzanne EstesDepartment of Biology, Portland State University.
Dee R DenverDepartment of Integrative Biology, Oregon State University denver@cgrb.oregonstate.edu.

Funding

Mutational and evolutionary impact of mitochondrial dysfunctionR01GM087628 · NIGMS · OREGON STATE UNIVERSITY · PI DENVER, DEE, ESTES, SUZANNE R · 2010 to 2014
$1.4M
NIGMS NIH HHS R01 GM087628
6 · The paper itself

Abstract

Evolutionary interactions across levels of biological organization contribute to a variety of fundamental processes including genome evolution, reproductive mode transitions, species diversification, and extinction. Evolutionary theory predicts that so-called "selfish" genetic elements will proliferate when the host effective population size (Ne) is small, but direct tests of this prediction remain few. We analyzed the evolutionary dynamics of deletion-containing mitochondrial DNA (ΔmtDNA) molecules, previously characterized as selfish elements, in six different natural strains of the nematode Caenorhabditis briggsae allowed to undergo experimental evolution in a range of population sizes (N = 1, 10, 100, and 1,000) for a maximum of 50 generations. Mitochondrial DNA (mtDNA) was analyzed for replicate lineages at each five-generation time point. Ten different ΔmtDNA molecule types were observed and characterized across generations in the experimental populations. Consistent with predictions from evolutionary theory, lab lines evolved in small-population sizes (e.g., nematode N = 1) were more susceptible to accumulation of high levels of preexisting ΔmtDNA compared with those evolved in larger populations. New ΔmtDNA elements were observed to increase in frequency and persist across time points, but almost exclusively at small population sizes. In some cases, ΔmtDNA levels decreased across generations when population size was large (nematode N = 1,000). Different natural strains of C. briggsae varied in their susceptibilities to ΔmtDNA accumulation, owing in part to preexisting compensatory mtDNA alleles in some strains that prevent deletion formation. This analysis directly demonstrates that the evolutionary trajectories of ΔmtDNA elements depend upon the population-genetic environments and molecular-genetic features of their hosts.

Indexed as

Evolution, MolecularAnimalsCaenorhabditisDNA, MitochondrialGenetic VariationGenome, MitochondrialMolecular Sequence DataPhylogenySequence DeletionDNA, Mitochondrialexperimental evolutiongenetic conflictmitochondrial DNAnematodepopulation sizeselfish genetic elements

Identifiers

PMID26108490
PMCPMC4524483

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.