Evidence map›Paper›PMID 26108223›Full record

ArticleJournal of lipid research2015

Structural insights into the substrate specificity of two esterases from the thermophilic Rhizomucor miehei.

Shaoqing Yang, Zhen Qin, Xiaojie Duan, Qiaojuan Yan, Zhengqiang Jiang

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 39 citations in OpenAlex.

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  3. Crystallization and preliminary X-ray crystallographic studies of AfeH from Acimetobacter sp. DL-2.Acta crystallographica. Section F, Structural biology communications · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Shaoqing YangCollege of Food Science and Nutritional Engineering, The Research and Innovation Center of Food Nutrition and Human Health (Beijing), China Agricultural University, Beijing 100083, China.
Zhen QinCollege of Food Science and Nutritional Engineering, The Research and Innovation Center of Food Nutrition and Human Health (Beijing), China Agricultural University, Beijing 100083, China.
Xiaojie DuanCollege of Food Science and Nutritional Engineering, The Research and Innovation Center of Food Nutrition and Human Health (Beijing), China Agricultural University, Beijing 100083, China.
Qiaojuan YanCollege of Engineering, China Agricultural University, Beijing 100083, China.
Zhengqiang JiangCollege of Food Science and Nutritional Engineering, The Research and Innovation Center of Food Nutrition and Human Health (Beijing), China Agricultural University, Beijing 100083, China.
China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two hormone-sensitive lipase (HSL) family esterases (RmEstA and RmEstB) from the thermophilic fungus Rhizomucor miehei, exhibiting distinct substrate specificity, have been recently reported to show great potential in industrial applications. In this study, the crystal structures of RmEstA and RmEstB were determined at 2.15 Å and 2.43 Å resolutions, respectively. The structures of RmEstA and RmEstB showed two distinctive domains, a catalytic domain and a cap domain, with the classical α/β-hydrolase fold. Catalytic triads consisting of residues Ser161, Asp262, and His292 in RmEstA, and Ser164, Asp261, and His291 in RmEstB were found in the respective canonical positions. Structural comparison of RmEstA and RmEstB revealed that their distinct substrate specificity might be attributed to their different substrate-binding pockets. The aromatic amino acids Phe222 and Trp92, located in the center of the substrate-binding pocket of RmEstB, blocked this pocket, thus narrowing its catalytic range for substrates (C2-C8). Two mutants (F222A and W92F in RmEstB) showing higher catalytic activity toward long-chain substrates further confirmed the hypothesized interference. This is the first report of HSL family esterase structures from filamentous fungi. The information on structure-function relationships could open important avenues of exploration for further industrial applications of esterases.

Indexed as

TemperatureCatalytic DomainEsterasesModels, MolecularRhizomucorStructure-Activity RelationshipSubstrate SpecificityEsterasescrystal structurehormone-sensitive lipasestructure-function relationshipsubstrate-binding pocket

Identifiers

PMID26108223
PMCPMC4514002
OpenAlexW2285928586

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.