Evidence map›Paper›PMID 26106581›Full record

ArticleMeta gene2015

Proteomic analysis of differentially expressed protein in hemocytes of wild giant freshwater prawn Macrobrachium rosenbergii infected with infectious hypodermal and hematopoietic necrosis virus (IHHNV).

T Alinejad, Kwong Q Bin, J Vejayan, R Y Othman, S Bhassu

Abstract read
In one paragraph

Article in Meta gene, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

T AlinejadGenetics and Molecular Biology Div., Institute of Biological Sciences, University of Malaya, Kuala Lumpur, Malaysia ; Centre for Research in Biotechnology for Agriculture, CEBAR, University of Malaya, Kuala Lumpur, Malaysia.
Kwong Q BinGenetics and Molecular Biology Div., Institute of Biological Sciences, University of Malaya, Kuala Lumpur, Malaysia.
J VejayanSchool of Medicine and Health Sciences, Monash University Sunway Campus, Jalan Lagoon Selatan, 46150 Subang Jaya, Selangor Darul Ehsan, Malaysia.
R Y OthmanGenetics and Molecular Biology Div., Institute of Biological Sciences, University of Malaya, Kuala Lumpur, Malaysia ; Centre for Research in Biotechnology for Agriculture, CEBAR, University of Malaya, Kuala Lumpur, Malaysia.
S BhassuGenetics and Molecular Biology Div., Institute of Biological Sciences, University of Malaya, Kuala Lumpur, Malaysia ; Centre for Research in Biotechnology for Agriculture, CEBAR, University of Malaya, Kuala Lumpur, Malaysia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epizootic diseases cause huge mortality and economical loses at post larvae stages in freshwater prawn aquaculture industry. These prawns seem less susceptible to viral diseases except for infectious hypodermal and hematopoietic necrosis virus (IHHNV). During viral infection in prawns, hemocytes are the primary organ that shows immunological response within the early stages of infection. We applied proteomic approaches to understand differential expression of the proteins in hemocytes during the viral disease outbreak. To aid the goal, we collected Macrobrachium rosenbergii broodstocks from the local grow out hatchery which reported the first incidence of IHHNV viral outbreak during larvae stage. Primarily, application of the OIE primer targeting 389 bp fragments of IHHNV virus was used in identification of the infected and non-infected samples of the prawn breeding line. Analysis of two-dimensional gel electrophoresis showed specific down-regulation of Arginine kinase and Sarcoplasmic calcium-binding protein and up/down-regulation of Prophenoloxidase1 and hemocyanin isoforms. These proteins were validated using semi quantitative RT-PCR and gene transcripts at mRNA level. These identified proteins can be used as biomarkers, providing a powerful approach to better understanding of the immunity pathway of viral disease with applications in analytic and observational epidemiology diagnosis. Proteomic profiling allows deep insight into the pathogenesis of IHHNV molecular regulation and mechanism of hemocyte in freshwater prawns.

Indexed as

Differentially expressed proteinsGenomicsHemocyteIHHNV virusProteomics

Identifiers

PMID26106581
PMCPMC4473098

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.