Evidence map›Paper›PMID 26106148›Full record

ArticleThe Plant cell2015

SWP73 Subunits of Arabidopsis SWI/SNF Chromatin Remodeling Complexes Play Distinct Roles in Leaf and Flower Development.

Sebastian P Sacharowski, Dominika M Gratkowska, Elzbieta A Sarnowska, Paulina Kondrak, Iga Jancewicz, Aimone Porri, Ernest Bucior, Anna T Rolicka, Rainer Franzen, Justyna Kowalczyk and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 50 citations in OpenAlex.

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  18. Telomerase Interaction Partners-Insight from Plants.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 3 countries.

Sebastian P SacharowskiInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland.
Dominika M GratkowskaInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland.
Elzbieta A SarnowskaMarie Curie Memorial Cancer Center, 02-781 Warsaw, Poland.
Paulina KondrakInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland Warsaw University of Life Sciences, 02-787 Warsaw, Poland.
Iga JancewiczInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland Warsaw University of Life Sciences, 02-787 Warsaw, Poland.
Aimone PorriMax-Planck Institut für Pflanzenzüchtungsforschung, D-50829 Köln, Germany.
Ernest BuciorInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland Universtity of Warsaw, Faculty of Biology, Institute of Experimental Plant Biology, Department of Plant Molecular Biology, 02-106 Warsaw, Poland.
Anna T RolickaInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland Universtity of Warsaw, Faculty of Biology, Institute of Experimental Plant Biology, Department of Plant Molecular Biology, 02-106 Warsaw, Poland.
Rainer FranzenMax-Planck Institut für Pflanzenzüchtungsforschung, D-50829 Köln, Germany.
Justyna KowalczykInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland.
Katarzyna PawlikowskaInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland.
Bruno HuettelMax Planck Genome Centre Cologne, D-50820 Köln, Germany.
Stefano TortiMax-Planck Institut für Pflanzenzüchtungsforschung, D-50829 Köln, Germany.
Elmon SchmelzerMax-Planck Institut für Pflanzenzüchtungsforschung, D-50829 Köln, Germany.
George CouplandMax-Planck Institut für Pflanzenzüchtungsforschung, D-50829 Köln, Germany.
Andrzej JerzmanowskiInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland Universtity of Warsaw, Faculty of Biology, Institute of Experimental Plant Biology, Department of Plant Molecular Biology, 02-106 Warsaw, Poland.
Csaba KonczMax-Planck Institut für Pflanzenzüchtungsforschung, D-50829 Köln, Germany Institute of Plant Biology, Biological Research Center of Hungarian Academy, H-6724 Szeged, Hungary.
Tomasz J SarnowskiInstitute of Biochemistry and Biophysics PAS, Department of Protein Biosynthesis, 02-106 Warsaw, Poland tsarn@ibb.waw.pl.ORCID http://orcid.org/0000-0002-3805-2039
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PLMax Planck Institute for Plant Breeding Research · DEWarsaw University of Life Sciences · PLHUN-REN Szegedi Biológiai Kutatóközpont · HUThe Maria Sklodowska-Curie National Research Institute of Oncology · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arabidopsis thaliana SWP73A and SWP73B are homologs of mammalian BRAHMA-associated factors (BAF60s) that tether SWITCH/SUCROSE NONFERMENTING chromatin remodeling complexes to transcription factors of genes regulating various cell differentiation pathways. Here, we show that Arabidopsis thaliana SWP73s modulate several important developmental pathways. While undergoing normal vegetative development, swp73a mutants display reduced expression of FLOWERING LOCUS C and early flowering in short days. By contrast, swp73b mutants are characterized by retarded growth, severe defects in leaf and flower development, delayed flowering, and male sterility. MNase-Seq, transcript profiling, and ChIP-Seq studies demonstrate that SWP73B binds the promoters of ASYMMETRIC LEAVES1 and 2, KANADI1 and 3, and YABBY2, 3, and 5 genes, which regulate leaf development and show coordinately altered transcription in swp73b plants. Lack of SWP73B alters the expression patterns of APETALA1, APETALA3, and the MADS box gene AGL24, whereas other floral organ identity genes show reduced expression correlating with defects in flower development. Consistently, SWP73B binds to the promoter regions of APETALA1 and 3, SEPALLATA3, LEAFY, UNUSUAL FLORAL ORGANS, TERMINAL FLOWER1, AGAMOUS-LIKE24, and SUPPRESSOR OF CONSTANS OVEREXPRESSION1 genes, and the swp73b mutation alters nucleosome occupancy on most of these loci. In conclusion, SWP73B acts as important modulator of major developmental pathways, while SWP73A functions in flowering time control.

Indexed as

ArabidopsisArabidopsis ProteinsChromatin ImmunoprecipitationChromosomal Proteins, Non-HistoneFlowersGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantMicrococcal NucleaseMutagenesis, InsertionalMutationNucleosomesPlant LeavesPromoter Regions, GeneticProtein BindingProtein SubunitsRNA, MessengerArabidopsis ProteinsChromosomal Proteins, Non-HistoneMicrococcal NucleaseNucleosomesProtein SubunitsRNA, MessengerSWI-SNF-B chromatin-remodeling complexTranscription Factors

Identifiers

PMID26106148
PMCPMC4531355
OpenAlexW1913484551

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.