Evidence map›Paper›PMID 26104556›Full record

ReviewMicrobiology spectrum2015

Mechanisms of Theta Plasmid Replication.

Joshua Lilly, Manel Camps

Abstract readReview
In one paragraph

Review in Microbiology spectrum, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Generating a Small Shuttle Vector for Effective Genetic Engineering ofInternational journal of molecular sciences · 2022
    Article
  8. Review
  9. Article
  10. Article
  11. Novel shuttle vector pGMβ1 for conjugative chromosomal manipulation ofBioscience of microbiota, food and health · 2022
    Article
  12. Article
  13. Differential Chromosome- and Plasmid-Borne Resistance ofInternational journal of molecular sciences · 2021
    Article
  14. Review
  15. Article
  16. Review
  17. Genomics of Atlantic ForestMicrobial genomics · 2020
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Joshua LillyDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, CA 95064.
Manel CampsDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, CA 95064.

Funding

Mechanisms of selective excision and oxidative repair of alkylated DNAR01ES019625 · NIEHS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI CAMPS, MANEL · 2011 to 2015
$1.7M
Creation of AlkB Mutants for Protection of Bone MarrowK08CA116429 · NCI · UNIVERSITY OF WASHINGTON · PI CAMPS, MANEL · 2006 to 2010
$657k
NCI NIH HHS K08CA116429NIEHS NIH HHS R01ES019625
6 · The paper itself

Abstract

Plasmids are autonomously replicating pieces of DNA. This article discusses theta plasmid replication, which is a class of circular plasmid replication that includes ColE1-like origins of replication popular with expression vectors. All modalities of theta plasmid replication initiate synthesis with the leading strand at a predetermined site and complete replication through recruitment of the host's replisome, which extends the leading strand continuously while synthesizing the lagging strand discontinuously. There are clear differences between different modalities of theta plasmid replication in mechanisms of DNA duplex melting and in priming of leading- and lagging-strand synthesis. In some replicons duplex melting depends on transcription, while other replicons rely on plasmid-encoded trans-acting proteins (Reps); primers for leading-strand synthesis can be generated through processing of a transcript or in other replicons by the action of host- or plasmid-encoded primases. None of these processes require DNA breaks. The frequency of replication initiation is tightly regulated to facilitate establishment in permissive hosts and to achieve a steady state. The last section of the article reviews how plasmid copy number is sensed and how this feedback modulates the frequency of replication.

Indexed as

DNA ReplicationPlasmidsBacteriaDNA, CircularDNA, Circular

Identifiers

PMID26104556
PMCPMC4441207

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.