Evidence map›Paper›PMID 26104467›Full record

ArticleGenes & development2015

Histone modifications predispose genome regions to breakage and translocation.

Bharat Burman, Zhuzhu Z Zhang, Gianluca Pegoraro, Jason D Lieb, Tom Misteli

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 50 citations in OpenAlex.

  1. Integration of epigenetics into ecotoxicology: insights and fundamental research needs.Biological reviews of the Cambridge Philosophical Society · 2026
    Review
  2. DNA damage reduces heterogeneity and coherence of chromatin motions.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Review
  4. The Role of Polycomb Group Protein BMI1 in DNA Repair and Genomic Stability.International journal of molecular sciences · 2021
    Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 1 country.

Bharat BurmanNational Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA; Program in Cell, Molecular, and Developmental Biology, Tufts University Sackler School of Biomedical Sciences, Boston, Massachusetts 02111, USA;
Zhuzhu Z ZhangDepartment of Biology, University of North Carolina, Chapel Hill, North Carolina 27599, USA; Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, California 92037, USA;
Gianluca PegoraroHigh-Throughput Imaging Facility, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA;
Jason D LiebDepartment of Biology, University of North Carolina, Chapel Hill, North Carolina 27599, USA; Department of Human Genetics, University of Chicago, Chicago, Illinois 60637, USA.
Tom MisteliNational Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA;
National Cancer Institute · USNational Institutes of Health · USSalk Institute for Biological Studies · USTufts University · USUniversity of Chicago · US

Funding

Nuclear Architecture and DiseaseZIABC010309 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MISTELI, THOMAS A · 2009 to 2025
$39.8M
HiTIF Microscopy Core FacilityZICBC011567 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PEGORARO, GIANLUCA · 2014 to 2025
$15.8M
Howard Hughes Medical InstituteIntramural NIH HHS
6 · The paper itself

Abstract

Chromosome translocations are well-established hallmarks of cancer cells and often occur at nonrandom sites in the genome. The molecular features that define recurrent chromosome breakpoints are largely unknown. Using a combination of bioinformatics, biochemical analysis, and cell-based assays, we identify here specific histone modifications as facilitators of chromosome breakage and translocations. We show enrichment of several histone modifications over clinically relevant translocation-prone genome regions. Experimental modulation of histone marks sensitizes genome regions to breakage by endonuclease challenge or irradiation and promotes formation of chromosome translocations of endogenous gene loci. Our results demonstrate that histone modifications predispose genome regions to chromosome breakage and translocations.

Indexed as

Chromosome BreakageTranslocation, GeneticCell Line, TumorComputational BiologyDNA Breaks, Double-StrandedEndonucleasesGenome, HumanHistonesHumansLymphoma, Large-Cell, AnaplasticMethylationEndonucleasesHistoneschromatin structurechromosome translocationshistone modifications

Identifiers

PMID26104467
PMCPMC4511214
OpenAlexW2181834069

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.