Evidence map›Paper›PMID 26102286›Full record

ArticlePloS one2015

The Link between Microbial Diversity and Nitrogen Cycling in Marine Sediments Is Modulated by Macrofaunal Bioturbation.

Maryam Yazdani Foshtomi, Ulrike Braeckman, Sofie Derycke, Melanie Sapp, Dirk Van Gansbeke, Koen Sabbe, Anne Willems, Magda Vincx, Jan Vanaverbeke

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 78 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Maryam Yazdani FoshtomiMarine Biology Research Group, Biology Department, Ghent University, Ghent, Belgium; CeMoFE, Ghent University, Ghent, Belgium.
Ulrike BraeckmanMarine Biology Research Group, Biology Department, Ghent University, Ghent, Belgium.
Sofie DeryckeMarine Biology Research Group, Biology Department, Ghent University, Ghent, Belgium.
Melanie SappThe Food and Environment Research Agency, Sand Hutton, York, United Kingdom.
Dirk Van GansbekeMarine Biology Research Group, Biology Department, Ghent University, Ghent, Belgium.
Koen SabbeLaboratory of Protistology and Aquatic Ecology, Department of Biology, Ghent University, Ghent, Belgium.
Anne WillemsCeMoFE, Ghent University, Ghent, Belgium; Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University, Ghent, Belgium.
Magda VincxMarine Biology Research Group, Biology Department, Ghent University, Ghent, Belgium.
Jan VanaverbekeMarine Biology Research Group, Biology Department, Ghent University, Ghent, Belgium.
Ghent University · BEFera Science (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesThe marine benthic nitrogen cycle is affected by both the presence and activity of macrofauna and the diversity of N-cycling microbes. However, integrated research simultaneously investigating macrofauna, microbes and N-cycling is lacking. We investigated spatio-temporal patterns in microbial community composition and diversity, macrofaunal abundance and their sediment reworking activity, and N-cycling in seven subtidal stations in the Southern North Sea. SPATIO-TEMPORAL PATTERNS OF THE MICROBIAL COMMUNITIES: Our results indicated that bacteria (total and β-AOB) showed more spatio-temporal variation than archaea (total and AOA) as sedimentation of organic matter and the subsequent changes in the environment had a stronger impact on their community composition and diversity indices in our study area. However, spatio-temporal patterns of total bacterial and β-AOB communities were different and related to the availability of ammonium for the autotrophic β-AOB. Highest bacterial richness and diversity were observed in June at the timing of the phytoplankton bloom deposition, while richness of β-AOB as well as AOA peaked in September. Total archaeal community showed no temporal variation in diversity indices. MACROFAUNA, MICROBES AND THE BENTHIC N-CYCLE: Distance based linear models revealed that, independent from the effect of grain size and the quality and quantity of sediment organic matter, nitrification and N-mineralization were affected by respectively the diversity of metabolically active β-AOB and AOA, and the total bacteria, near the sediment-water interface. Separate models demonstrated a significant and independent effect of macrofaunal activities on community composition and richness of total bacteria, and diversity indices of metabolically active AOA. Diversity of β-AOB was significantly affected by macrofaunal abundance. Our results support the link between microbial biodiversity and ecosystem functioning in marine sediments, and provided broad correlative support for the hypothesis that this relationship is modulated by macrofaunal activity. We hypothesized that the latter effect can be explained by their bioturbating and bio-irrigating activities, increasing the spatial complexity of the biogeochemical environment.

Indexed as

Marine BiologyMicrobiotaGeologic SedimentsNitrogenNitrogen

Identifiers

PMID26102286
PMCPMC4477903
OpenAlexW2218406867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.