Evidence map›Paper›PMID 26101185›Full record

ArticleBiotechnology progress

A novel endo-β-N-acetylglucosaminidase releases specific N-glycans depending on different reaction conditions.

Annabelle Le Parc, Sercan Karav, Juliana Maria Leite Nobrega De Moura Bell, Steven A Frese, Yan Liu, David A Mills, David E Block, Daniela Barile

Abstract read
In one paragraph

Article in Biotechnology progress. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 24 citations in OpenAlex.

  1. Substrate Versatility of a Recombinant Bifidobacterial Endoglycosidase:International journal of molecular sciences · 2026
    Article
  2. Fucosidosis: A Review of a Rare Disease.International journal of molecular sciences · 2025
    Review
  3. Identification and comparison ofFood chemistry: X · 2025
    Article
  4. Review
  5. Article
  6. Review
  7. Immobilization of a Bifidobacterial Endo-Frontiers in bioengineering and biotechnology · 2022
    Article
  8. Review
  9. Review
  10. Potential Applications of Endo-β-Frontiers in nutrition · 2021
    Review
  11. Article
  12. Article
  13. Molecular Insights IntoFrontiers in microbiology · 2020
    Review
  14. Immobilization of an Endo-β-Catalysts (Basel, Switzerland) · 2018
    Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Annabelle Le Parc *Dept. of Food Science and Technology, University of California, One Shields Avenue, Davis, CA 95616.
Sercan Karav *Dept. of Food Science and Technology, University of California, One Shields Avenue, Davis, CA 95616.
Juliana Maria Leite Nobrega De Moura BellDept. of Food Science and Technology, University of California, One Shields Avenue, Davis, CA 95616.
Steven A FreseDept. of Food Science and Technology, University of California, One Shields Avenue, Davis, CA 95616.
Yan LiuDept. of Food Science and Technology, University of California, One Shields Avenue, Davis, CA 95616.
David A MillsDept. of Food Science and Technology, University of California, One Shields Avenue, Davis, CA 95616.
David E BlockDept. of Viticulture and Enology, University of California, Davis, CA 95616.
Daniela BarileDept. of Food Science and Technology, University of California, One Shields Avenue, Davis, CA 95616.
University of California, Davis · US

Funding

Activation of probiotic bifidobacteria by milk glyansR01AT008759 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GERMAN, BRUCE, LEBRILLA, CARLITO B · 2014 to 2018
$4.2M
Mechanism of Activation of Probiotic Bifidobacteria by Prebiotic Milk GlycansR01AT007079 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GERMAN, BRUCE, LEBRILLA, CARLITO B · 2012 to 2016
$2.2M
The Impact of Milk Glycopeptide and Bifidobacterium on the Weaning MicrobiotaF32AT008533 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI FRESE, STEVEN · 2015 to 2015
$22k
NCCIH NIH HHS F32 AT008533NCCIH NIH HHS F32AT008533NCCIH NIH HHS R01 AT007079NCCIH NIH HHS R01AT007079NCCIH NIH HHS R01 AT008759NCCIH NIH HHS R01AT008759
6 · The paper itself

Abstract

Milk glycoproteins are involved in different functions and contribute to different cellular processes, including adhesion and signaling, and shape the development of the infant microbiome. Methods have been developed to study the complexities of milk protein glycosylation and understand the role of N-glycans in protein functionality. Endo-β-N-acetylglucosaminidase (EndoBI-1) isolated from Bifidobacterium longum subsp. infantis ATCC 15697 is a recently isolated heat-stable enzyme that cleaves the N-N'-diacetyl chitobiose moiety found in the N-glycan core. The effects of different processing conditions (pH, temperature, reaction time, and enzyme/protein ratio) were evaluated for their ability to change EndoBI-1 activity on bovine colostrum whey glycoproteins using advanced mass spectrometry. This study shows that EndoBI-1 is able to cleave a high diversity of N-glycan structures. Nano-LC-Chip-Q-TOF MS data also revealed that different reaction conditions resulted in different N-glycan compositions released, thus modifying the relative abundance of N-glycan types. In general, more sialylated N-glycans were released at lower temperatures and pH values. These results demonstrated that EndoBI-1 is able to release a wide variety of N-glycans, whose compositions can be selectively manipulated using different processing conditions.

Indexed as

AnimalsBifidobacteriumCattleChemical PhenomenaColostrumGlycoproteinsGlycosylationHydrogen-Ion ConcentrationMannosyl-Glycoprotein Endo-beta-N-AcetylglucosaminidaseMilk ProteinsPilot ProjectsPolysaccharidesTemperatureGlycoproteinsMannosyl-Glycoprotein Endo-beta-N-AcetylglucosaminidaseMilk ProteinsPolysaccharidesdeglycosylationN-glycanswhey

Identifiers

PMID26101185
PMCPMC4623945
OpenAlexW1899146791

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.