Evidence map›Paper›PMID 26100889›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Assessing niche width of endothermic fish from genes to ecosystem.

Daniel J Madigan, Aaron B Carlisle, Luke D Gardner, Nishad Jayasundara, Fiorenza Micheli, Kurt M Schaefer, Daniel W Fuller, Barbara A Block

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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  11. TrackingZoological studies · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Daniel J MadiganTuna Research and Conservation Center of Hopkins Marine Station, Stanford University, Pacific Grove, CA 93950; daniel.madigan@stonybrook.edu.
Aaron B CarlisleTuna Research and Conservation Center of Hopkins Marine Station, Stanford University, Pacific Grove, CA 93950;
Luke D GardnerTuna Research and Conservation Center of Hopkins Marine Station, Stanford University, Pacific Grove, CA 93950;
Nishad JayasundaraTuna Research and Conservation Center of Hopkins Marine Station, Stanford University, Pacific Grove, CA 93950;
Fiorenza MicheliHopkins Marine Station, Stanford University, Pacific Grove, CA 93950;
Kurt M SchaeferInter-American Tropical Tuna Commission, La Jolla, CA 92037.
Daniel W FullerInter-American Tropical Tuna Commission, La Jolla, CA 92037.
Barbara A BlockTuna Research and Conservation Center of Hopkins Marine Station, Stanford University, Pacific Grove, CA 93950;

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endothermy in vertebrates has been postulated to confer physiological and ecological advantages. In endothermic fish, niche expansion into cooler waters is correlated with specific physiological traits and is hypothesized to lead to greater foraging success and increased fitness. Using the seasonal co-occurrence of three tuna species in the eastern Pacific Ocean as a model system, we used cardiac gene expression data (as a proxy for thermal tolerance to low temperatures), archival tag data, and diet analyses to examine the vertical niche expansion hypothesis for endothermy in situ. Yellowfin, albacore, and Pacific bluefin tuna (PBFT) in the California Current system used more surface, mesopelagic, and deep waters, respectively. Expression of cardiac genes for calcium cycling increased in PBFT and coincided with broader vertical and thermal niche utilization. However, the PBFT diet was less diverse and focused on energy-rich forage fishes but did not show the greatest energy gains. Ecosystem-based management strategies for tunas should thus consider species-specific differences in physiology and foraging specialization.

Indexed as

EcosystemAdaptation, PhysiologicalAnimalsCalciumCaliforniaFeeding BehaviorFish ProteinsGene ExpressionGeographyPacific OceanRyanodine Receptor Calcium Release ChannelSarcoplasmic ReticulumSarcoplasmic Reticulum Calcium-Transporting ATPasesSpecies SpecificityTemperatureTunaCalciumFish ProteinsRyanodine Receptor Calcium Release ChannelSarcoplasmic Reticulum Calcium-Transporting ATPasesendothermyevolutionpelagicThunnustuna

Identifiers

PMID26100889
PMCPMC4500250

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.