Evidence map›Paper›PMID 26100624›Full record

ArticleThe Journal of biological chemistry2015

Dimerization Domain of Retinal Membrane Guanylyl Cyclase 1 (RetGC1) Is an Essential Part of Guanylyl Cyclase-activating Protein (GCAP) Binding Interface.

Igor V Peshenko, Elena V Olshevskaya, Alexander M Dizhoor

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. cGMP Signaling in Photoreceptor Degeneration.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. The Journal of biological chemistry · 2020
    Article
  11. Article
  12. Article
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  14. Article
  15. Article
  16. Article
  17. Role of the nucleotidyl cyclase helical domain in catalytically active dimer formation.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Igor V PeshenkoFrom the Department of Research, Salus University, Elkins Park, Pennsylvania 19027.
Elena V OlshevskayaFrom the Department of Research, Salus University, Elkins Park, Pennsylvania 19027.
Alexander M DizhoorFrom the Department of Research, Salus University, Elkins Park, Pennsylvania 19027 adizhoor@salus.edu.
Salus University · US

Funding

REGULATION OF CYCLIC GMP SYNTHESIS IN PHOTORECEPTORSR01EY011522 · NEI · WAYNE STATE UNIVERSITY · PI ALEXANDER M DIZHOOR · 1996 to 2026
$9.9M
NEI NIH HHS EY11522NEI NIH HHS R01 EY011522
6 · The paper itself

Abstract

The photoreceptor-specific proteins guanylyl cyclase-activating proteins (GCAPs) bind and regulate retinal membrane guanylyl cyclase 1 (RetGC1) but not natriuretic peptide receptor A (NPRA). Study of RetGC1 regulation in vitro and its association with fluorescently tagged GCAP in transfected cells showed that R822P substitution in the cyclase dimerization domain causing congenital early onset blindness disrupted RetGC1 ability to bind GCAP but did not eliminate its affinity for another photoreceptor-specific protein, retinal degeneration 3 (RD3). Likewise, the presence of the NPRA dimerization domain in RetGC1/NPRA chimera specifically disabled binding of GCAPs but not of RD3. In subsequent mapping using hybrid dimerization domains in RetGC1/NPRA chimera, multiple RetGC1-specific residues contributed to GCAP binding by the cyclase, but the region around Met(823) was the most crucial. Either positively or negatively charged residues in that position completely blocked GCAP1 and GCAP2 but not RD3 binding similarly to the disease-causing mutation in the neighboring Arg(822). The specificity of GCAP binding imparted by RetGC1 dimerization domain was not directly related to promoting dimerization of the cyclase. The probability of coiled coil dimer formation computed for RetGC1/NPRA chimeras, even those incapable of binding GCAP, remained high, and functional complementation tests showed that the RetGC1 active site, which requires dimerization of the cyclase, was formed even when Met(823) or Arg(822) was mutated. These results directly demonstrate that the interface for GCAP binding on RetGC1 requires not only the kinase homology region but also directly involves the dimerization domain and especially its portion containing Arg(822) and Met(823).

Indexed as

Amino Acid SequenceAmino Acid SubstitutionArginineBinding SitesEye ProteinsGene Expression RegulationGenes, ReporterGuanylate CyclaseGuanylate Cyclase-Activating ProteinsHEK293 CellsHumansLuminescent ProteinsMethionineModels, MolecularMolecular Sequence DataMutationArginineatrial natriuretic factor receptor AEye Proteinsfluorescent protein 583Guanylate Cyclaseguanylate cyclase 1Guanylate Cyclase-Activating ProteinsGUCA1A protein, humanGUCA1B protein, humanLuminescent ProteinsMethionineRD3 protein, humanReceptors, Atrial Natriuretic FactorReceptors, Cell SurfaceRecombinant Fusion Proteinscalcium-binding proteincyclic GMP (cGMP)eyeguanylate cyclase (guanylyl cyclase)neurobiologyphototransduction

Identifiers

PMID26100624
PMCPMC4528125
OpenAlexW1938954334

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.