Evidence map›Paper›PMID 26100556›Full record

ArticleBMC gastroenterology2015

Genetic mutations in SPINK1, CFTR, CTRC genes in acute pancreatitis.

Dorota Koziel, Stanislaw Gluszek, Artur Kowalik, Malgorzata Chlopek, Liliana Pieciak

Open access · goldAbstract read
In one paragraph

Article in BMC gastroenterology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Review
  5. Article
  6. Genetic Variability in theInternational journal of molecular sciences · 2024
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Genetic Polymorphisms: A Novel Perspective on Acute Pancreatitis.Gastroenterology research and practice · 2017
    Review
  17. Review
  18. A Case of Chronic Calcific Nonalcoholic Pancreatitis.Case reports in gastrointestinal medicine · 2016
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Dorota KozielFaculty of Health Sciences, Jan Kochanowski University, Kielce, Poland. dorota.koziel@wp.pl.
Stanislaw GluszekFaculty of Health Sciences, Jan Kochanowski University, Kielce, Poland. sgluszek@wp.pl.
Artur KowalikDepartment of Molecular Diagnostics, Holy Cross Cancer Centre, Kielce, Poland. artur_kowalik@yahoo.com.
Malgorzata ChlopekDepartment of Molecular Diagnostics, Holy Cross Cancer Centre, Kielce, Poland. malgo.chlopek@gmail.com.
Liliana PieciakDepartment of Molecular Diagnostics, Holy Cross Cancer Centre, Kielce, Poland. lilianamazurek@o2.pl.
Holy Cross University · PLJan Kochanowski University · PLLublin Oncology Center · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExplanation of the ultimate causes of acute and chronic pancreatitis is challenging. Hence, it is necessary to seek various etiological factors, including genetic mutations that may be of importance in triggering recurrence and progression of acute to chronic pancreatitis. The aim of this study was to determine the frequency of genetic mutations in patients with acute pancreatitis and to investigate their relationship with the etiology and clinical course.

methodsThe study included 221 patients treated for acute pancreatitis and 345 healthy subjects as a control group. Peripheral blood samples were collected from each study participant and genomic DNA was isolated. Genotyping of common mutations in the SPINK1 (p.N34S and p.P55S) and CTRC (p.I259V, p.V235I, p.K247_R254del, p.E225A) genes was performed using the high-resolution melting method. Mutations in the CFTR p.F508del (delF508_CTT) were genotyped using allele-specific amplification polymerase chain reaction. All detected mutations were confirmed with direct capillary DNA sequencing.

resultsMutations in SPINK 1, CFTR and CTRC were detected in 6.3%, 2.3% and 1.8% of patients with acute pancreatitis versus 3.2%, 3.8% and 1.2% of volunteers in the control group. No relationship was found between the detected mutations and severity of acute pancreatitis: mild acute pancreatitis, mutation of CFTR in 4 (2.8%) and CTRC in 2 (1.4%) patients; severe acute pancreatitis, mutation of CFTR and CTRC in 1 (2.6%) case each. The SPINK1 mutation was significantly more frequent in 8 (10.4%) severe cases than in 6 (4.2%) mild cases (P < 0.05), and was observed in 5/70 (7.1%) patients with alcohol-related AP, 5/81 (6.2%) with biliary AP, and 4/63 (6.3%) in those without any established cause of the disease.

conclusionsMutation p.N34S in SPINK1 may predispose patients to acute pancreatitis, especially in those abusing alcohol, and may promote a more severe course of the disease.

Indexed as

Genetic Predisposition to DiseaseMutationAcute DiseaseAdultAgedCarrier ProteinsCase-Control StudiesChymotrypsinCystic Fibrosis Transmembrane Conductance RegulatorDisease ProgressionFemaleGenetic MarkersGenotypeGenotyping TechniquesHumansMaleCarrier ProteinsCFTR protein, humanChymotrypsinchymotrypsin CCystic Fibrosis Transmembrane Conductance RegulatorGenetic MarkersSPINK1 protein, humanTrypsin Inhibitor, Kazal Pancreatic

Identifiers

PMID26100556
PMCPMC4476205
OpenAlexW1598323708

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.