Evidence map›Paper›PMID 26100409›Full record

ArticleGenome biology and evolution2015

The Rise and Fall of TRP-N, an Ancient Family of Mechanogated Ion Channels, in Metazoa.

Andreas Schüler, Gregor Schmitz, Abigail Reft, Suat Özbek, Ulrich Thurm, Erich Bornberg-Bauer

Abstract read
In one paragraph

Article in Genome biology and evolution, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Review
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  4. Evolution of Sensory Receptors.Annual review of cell and developmental biology · 2024
    Review
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  7. Article
  8. Reafference and the origin of the self in early nervous system evolution.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
  9. Article
  10. Bacteria- and temperature-regulated peptides modulate β-catenin signaling inProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Diversity of cilia-based mechanosensory systems and their functions in marine animal behaviour.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Evolution of Protein Domain Repeats in Metazoa.Molecular biology and evolution · 2016
    Article
  20. Genomic data do not support comb jellies as the sister group to all other animals.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Andreas SchülerInstitute for Evolution and Biodiversity, University of Muenster, Germany.
Gregor SchmitzInstitute for Evolution and Biodiversity, University of Muenster, Germany.
Abigail ReftCentre for Organismal Studies, University of Heidelberg, Germany.
Suat ÖzbekCentre for Organismal Studies, University of Heidelberg, Germany HEIKA-Heidelberg Karlsruhe Research Partnership, Heidelberg University, Karlsruhe Institute of Technology (KIT), Heidelberg and Karlsruhe, Germany.
Ulrich ThurmInstitute for Neurobiology and Behavioural Biology, University of Muenster, Germany.
Erich Bornberg-BauerInstitute for Evolution and Biodiversity, University of Muenster, Germany ebb@wwu.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mechanoreception, the sensing of mechanical forces, is an ancient means of orientation and communication and tightly linked to the evolution of motile animals. In flies, the transient-receptor-potential N protein (TRP-N) was found to be a cilia-associated mechanoreceptor. TRP-N belongs to a large and diverse family of ion channels. Its unusually long N-terminal repeat of 28 ankyrin domains presumably acts as the gating spring by which mechanical energy induces channel gating. We analyzed the evolutionary origins and possible diversification of TRP-N. Using a custom-made set of highly discriminative sequence profiles we scanned a representative set of metazoan genomes and subsequently corrected several gene models. We find that, contrary to other ion channel families, TRP-N is remarkably conserved in its domain arrangements and copy number (1) in all Bilateria except for amniotes, even in the wake of several whole-genome duplications. TRP-N is absent in Porifera but present in Ctenophora and Placozoa. Exceptional multiplications of TRP-N occurred in Cnidaria, independently along the Hydra and the Nematostella lineage. Molecular signals of subfunctionalization can be attributed to different mechanisms of activation of the gating spring. In Hydra this is further supported by in situ hybridization and immune staining, suggesting that at least three paralogs adapted to nematocyte discharge, which is key for predation and defense. We propose that these new candidate proteins help explain the sensory complexity of Cnidaria which has been previously observed but so far has lacked a molecular underpinning. Also, the ancient appearance of TRP-N supports a common origin of important components of the nervous systems in Ctenophores, Cnidaria, and Bilateria.

Indexed as

Evolution, MolecularMultigene FamilyAnimalsCnidariaGene DosageHydraIon ChannelsPhylogenyProtein Structure, TertiaryTransient Receptor Potential ChannelsIon ChannelsTransient Receptor Potential ChannelsCnidariadomain rearrangementsmechanosensationnematocyst evolutionneurobiologyprotein evolution

Identifiers

PMID26100409
PMCPMC4494053

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.