Evidence map›Paper›PMID 26099270›Full record

ArticlePlant physiology2015

Large Cellular Inclusions Accumulate in Arabidopsis Roots Exposed to Low-Sulfur Conditions.

Terry L Jackson, Ginger W Baker, Floyd R Wilks, Vladimir A Popov, Jaideep Mathur, Philip N Benfey

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Spatiotemporal analysis identifies ABF2 and ABF3 as key hubs of endodermal response to nitrate.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Terry L JacksonDepartment of Biology and Howard Hughes Medical Institute, Duke University, Durham, North Carolina 27708 (T.L.J., G.W.B., F.R.W., V.A.P., P.N.B.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (J.M.).ORCID http://orcid.org/0000-0003-2387-6411
Ginger W BakerDepartment of Biology and Howard Hughes Medical Institute, Duke University, Durham, North Carolina 27708 (T.L.J., G.W.B., F.R.W., V.A.P., P.N.B.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (J.M.).ORCID http://orcid.org/0000-0002-5699-9875
Floyd R WilksDepartment of Biology and Howard Hughes Medical Institute, Duke University, Durham, North Carolina 27708 (T.L.J., G.W.B., F.R.W., V.A.P., P.N.B.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (J.M.).ORCID http://orcid.org/0000-0001-5395-2919
Vladimir A PopovDepartment of Biology and Howard Hughes Medical Institute, Duke University, Durham, North Carolina 27708 (T.L.J., G.W.B., F.R.W., V.A.P., P.N.B.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (J.M.).
Jaideep MathurDepartment of Biology and Howard Hughes Medical Institute, Duke University, Durham, North Carolina 27708 (T.L.J., G.W.B., F.R.W., V.A.P., P.N.B.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (J.M.).
Philip N BenfeyDepartment of Biology and Howard Hughes Medical Institute, Duke University, Durham, North Carolina 27708 (T.L.J., G.W.B., F.R.W., V.A.P., P.N.B.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (J.M.) philip.benfey@duke.edu.
Howard Hughes Medical Institute · USUniversity of Guelph · CA

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Sulfur is vital for primary and secondary metabolism in plant roots. To understand the molecular and morphogenetic changes associated with loss of this key macronutrient, we grew Arabidopsis (Arabidopsis thaliana) seedlings in low-sulfur conditions. These conditions induced a cascade of cellular events that converged to produce a profound intracellular phenotype defined by large cytoplasmic inclusions. The inclusions, termed low-sulfur Pox, show cell type- and developmental zone-specific localization. Transcriptome analysis suggested that low sulfur causes dysfunction of the glutathione/ascorbate cycle, which reduces flavonoids. Genetic and biochemical evidence indicated that low-sulfur Pox are the result of peroxidase-catalyzed oxidation of quercetin in roots grown under sulfur-depleted conditions.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression ProfilingGlucosinolatesGlutathioneInclusion BodiesLuminescent ProteinsMicroscopy, ConfocalMutationOxidation-ReductionPeroxidasePhenylpropionatesPlant RootsPlants, Genetically ModifiedQuercetinSeedlingsArabidopsis ProteinsGlucosinolatesGlutathioneLuminescent ProteinsPeroxidasePhenylpropionatesQuercetinSulfatesSulfur

Identifiers

PMID26099270
PMCPMC4528750
OpenAlexW2100785959

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.