Evidence map›Paper›PMID 26099266›Full record

ArticleMalaria journal2015

Optimization of a multi-well colorimetric assay to determine haem species in Plasmodium falciparum in the presence of anti-malarials.

Jill M Combrinck, Kim Y Fong, Liezl Gibhard, Peter J Smith, David W Wright, Timothy J Egan

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 93 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Jill M CombrinckDivision of Pharmacology, Department of Medicine, University of Cape Town, Observatory 7925, Cape Town, South Africa. cmbjil001@myuct.ac.za.
Kim Y FongDepartment of Chemistry, Vanderbilt University, Station B 351822, Nashville, TN, 37235, USA. kim.y.fong@vanderbilt.edu.
Liezl GibhardDivision of Pharmacology, Department of Medicine, University of Cape Town, Observatory 7925, Cape Town, South Africa. Gibhard@uct.ac.za.
Peter J SmithDivision of Pharmacology, Department of Medicine, University of Cape Town, Observatory 7925, Cape Town, South Africa. Peter.Smith@uct.ac.za.
David W WrightDepartment of Chemistry, Vanderbilt University, Station B 351822, Nashville, TN, 37235, USA. David.Wright@vanderbilt.edu.
Timothy J EganDepartment of Chemistry, University of Cape Town, Private Bag, Rondebosch, 7701, South Africa. Timothy.Egan@uct.ac.za.
University of Cape Town · ZAVanderbilt University · US

Funding

Plasmodium heme detoxification probesR01AI110329 · NIAID · UNIVERSITY OF CAPE TOWN · PI EGAN, TIMOTHY JOHN · 2014 to 2018
$668k
NIAID NIH HHS R01 AI110329NIAID NIH HHS R01AI110329
6 · The paper itself

Abstract

backgroundThe activity of several well-known anti-malarials, including chloroquine (CQ), is attributed to their ability to inhibit the formation of haemozoin (Hz) in the malaria parasite. The formation of inert Hz, or malaria pigment, from toxic haem acquired from the host red blood cell of the parasite during haemoglobin digestion represents a pathway essential for parasite survival. Inhibition of this critical pathway therefore remains a desirable target for novel anti-malarials. A recent publication described the results of a haem fractionation assay used to directly determine haemoglobin, free haem and Hz in Plasmodium falciparum inoculated with CQ. CQ was shown to cause a dose-dependent increase in cellular-free haem that was correlated with decreased parasite survival. The method provided valuable information but was limited due to its low throughput and high demand on parasite starting material. Here, this haem fractionation assay has been successfully adapted to a higher throughput method in 24-well plates, significantly reducing lead times and starting material volumes.

methodsAll major haem species in P. falciparum trophozoites, isolated through a series of cellular fractionation steps were determined spectrophotometrically in aqueous pyridine (5 % v/v, pH 7.5) as a low spin complex with haematin. Cell counts were determined using a haemocytometer and a rapid novel fluorescent flow cytometry method.

resultsA higher throughput haem fractionation assay in 24-well plates, containing at most ten million trophozoites was validated against the original published method using CQ and its robustness was confirmed. It provided a minimum six-fold improvement in productivity and 24-fold reduction in starting material volume. The assay was successfully applied to amodiaquine (AQ), which was shown to inhibit Hz formation, while the antifolate pyrimethamine (PYR) and the mitochondrial electron transporter inhibitor atovaquone (Atov) demonstrated no increase in toxic cellular free haem.

conclusionsThis higher throughput cellular haem fractionation assay can easily be applied to novel anti-malarials with a significantly decreased lead time, providing a valuable tool with which to probe the mechanisms of action of both new and established anti-malarials.

Indexed as

AmodiaquineAntimalarialsAtovaquoneChloroquineColorimetryHemePlasmodium falciparumPyrimethamineTrophozoitesAmodiaquineAntimalarialsAtovaquoneChloroquineHemePyrimethamine

Identifiers

PMID26099266
PMCPMC4484700
OpenAlexW2096823024

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.