Evidence map›Paper›PMID 26098867›Full record

ArticleNature genetics2015

Consistent in-frame internal tandem duplications of BCOR characterize clear cell sarcoma of the kidney.

Hitomi Ueno-Yokohata, Hajime Okita, Keiko Nakasato, Shingo Akimoto, Jun-ichi Hata, Tsugumichi Koshinaga, Masahiro Fukuzawa, Nobutaka Kiyokawa

Abstract read
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In one paragraph

Article in Nature genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 171 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
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  6. Paediatric renal tumours: an update on challenges and recent developments.Virchows Archiv : an international journal of pathology · 2025
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Rare Case of BCOR::CCNB3 Sarcoma of Bone.The American journal of case reports · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Small round cell sarcomas.Nature reviews. Disease primers · 2022
    Review
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Hitomi Ueno-YokohataDepartment of Pediatric Hematology and Oncology Research, National Research Institute for Child Health and Development, Tokyo, Japan.
Hajime OkitaDepartment of Pediatric Hematology and Oncology Research, National Research Institute for Child Health and Development, Tokyo, Japan.
Keiko NakasatoDepartment of Pediatric Hematology and Oncology Research, National Research Institute for Child Health and Development, Tokyo, Japan.
Shingo AkimotoDepartment of Pediatric Hematology and Oncology Research, National Research Institute for Child Health and Development, Tokyo, Japan.
Jun-ichi HataCentral Institute for Experimental Animals, Kawasaki, Japan.
Tsugumichi KoshinagaDepartment of Pediatric Surgery, Nihon University School of Medicine, Tokyo, Japan.
Masahiro FukuzawaOsaka Medical Center and Research Institute for Maternal and Child Health, Osaka, Japan.
Nobutaka KiyokawaDepartment of Pediatric Hematology and Oncology Research, National Research Institute for Child Health and Development, Tokyo, Japan.
National Center For Child Health and Development · JPCentral Institute for Experimental Animals · JPNihon University · JPOsaka Medical Center for Cancer and Cardiovascular Diseases · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clear cell sarcoma of the kidney (CCSK) is one of the major pediatric renal neoplasms, but its associated genetic abnormalities are largely unknown. We identified internal tandem duplications in the BCOR gene (BCL6 corepressor) affecting the C terminus in 100% (20/20) of CCSK tumors but in none (0/193) of the other pediatric renal tumors. CCSK tumors expressed only an aberrant BCOR allele, indicating a close correlation between BCOR aberration and CCSK tumorigenesis.

Indexed as

Amino Acid SequenceBase SequenceBlotting, WesternChildFemaleGene Expression Regulation, NeoplasticHEK293 CellsHumansImmunohistochemistryKidney NeoplasmsMolecular Sequence DataProto-Oncogene ProteinsRepressor ProteinsReverse Transcriptase Polymerase Chain ReactionSarcoma, Clear CellSequence Analysis, DNABCOR protein, humanProto-Oncogene ProteinsRepressor Proteins

Identifiers

PMID26098867
OpenAlexW2209758350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.