Evidence map›Paper›PMID 26096734›Full record

ArticleDevelopmental cell2015

POS-1 Promotes Endo-mesoderm Development by Inhibiting the Cytoplasmic Polyadenylation of neg-1 mRNA.

Ahmed Elewa, Masaki Shirayama, Ebru Kaymak, Paul F Harrison, David R Powell, Zhuo Du, Christopher D Chute, Hannah Woolf, Dongni Yi, Takao Ishidate and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Landscape and regulation of mRNA translation in the earlybioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. Measuring the tail: Methods for poly(A) tail profiling.Wiley interdisciplinary reviews. RNA · 2023
    Review
  8. C22 disrupts embryogenesis and extendsFrontiers in physiology · 2023
    Article
  9. Article
  10. Article
  11. The role of RNA-binding proteins in orchestrating germline development inFrontiers in cell and developmental biology · 2022
    Review
  12. Article
  13. Article
  14. mRNA localization is linked to translation regulation in theDevelopment (Cambridge, England) · 2020
    Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Ahmed ElewaProgram in Molecular Medicine, RNA Therapeutics Institute and Howard Hughes Medical Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA 01605, USA.
Masaki ShirayamaProgram in Molecular Medicine, RNA Therapeutics Institute and Howard Hughes Medical Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA 01605, USA.
Ebru KaymakDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Paul F HarrisonVictorian Bioinformatics Consortium, Monash University, Clayton, Victoria 3800, Australia; Life Sciences Computation Centre, Victorian Life Sciences Computation Initiative, Carlton, Victoria 3053, Australia.
David R PowellVictorian Bioinformatics Consortium, Monash University, Clayton, Victoria 3800, Australia; Life Sciences Computation Centre, Victorian Life Sciences Computation Initiative, Carlton, Victoria 3053, Australia.
Zhuo DuDevelopmental Biology Program, Sloan-Kettering Institute, New York, NY 10065, USA.
Christopher D ChuteDepartment of Biology and Biotechnology, Worcester Polytechnic Institute, Life Science and Bioengineering Center, Gateway Park, 60 Prescott Street, Worcester, MA 01605, USA.
Hannah WoolfProgram in Molecular Medicine, RNA Therapeutics Institute and Howard Hughes Medical Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA 01605, USA.
Dongni YiProgram in Molecular Medicine, RNA Therapeutics Institute and Howard Hughes Medical Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA 01605, USA.
Takao IshidateProgram in Molecular Medicine, RNA Therapeutics Institute and Howard Hughes Medical Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA 01605, USA.
Jagan SrinivasanDepartment of Biology and Biotechnology, Worcester Polytechnic Institute, Life Science and Bioengineering Center, Gateway Park, 60 Prescott Street, Worcester, MA 01605, USA.
Zhirong BaoDevelopmental Biology Program, Sloan-Kettering Institute, New York, NY 10065, USA.
Traude H BeilharzDepartment of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria 3800, Australia.
Sean P RyderDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Craig C MelloProgram in Molecular Medicine, RNA Therapeutics Institute and Howard Hughes Medical Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA 01605, USA. Electronic address: craig.mello@umassmed.edu.
Howard Hughes Medical Institute · USKettering University · USMelbourne Bioinformatics · AUUniversity of Massachusetts Chan Medical School · USWorcester Polytechnic Institute · USMonash University · AU

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
RNA Mediated Genetic Interference in C. elegansR37GM058800 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MELLO, CRAIG C · 2015 to 2024
$3.7M
The Ubiquitin-Proteasome System in Metazoan EmbryogenesisR01GM097576 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI BAO, ZHIRONG · 2011 to 2020
$3.3M
An integrated system to monitor complex tissues at single-cell resolutionU01HD075602 · NICHD · SLOAN-KETTERING INST CAN RESEARCH · PI BAO, ZHIRONG · 2012 to 2016
$3.1M
CELL POLARITY SIGNALING IN C ELEGANS EMBRYOSR01HD036247 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MELLO, CRAIG C · 1999 to 2008
$2.2M
PIE-1 GENE AND GERM CELL DETERMINATION IN C ELEGANSR01HD033769 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MELLO, CRAIG C. · 1996 to 1999
–
Howard Hughes Medical InstituteNCI NIH HHS P30 CA008748NICHD NIH HHS HD33769NICHD NIH HHS HD36247NICHD NIH HHS R01 HD036247NICHD NIH HHS U01 HD075602NIGMS NIH HHS R01 GM097576NIGMS NIH HHS R37 GM058800
6 · The paper itself

Abstract

The regulation of mRNA translation is of fundamental importance in biological mechanisms ranging from embryonic axis specification to the formation of long-term memory. POS-1 is one of several CCCH zinc-finger RNA-binding proteins that regulate cell fate specification during C. elegans embryogenesis. Paradoxically, pos-1 mutants exhibit striking defects in endo-mesoderm development but have wild-type distributions of SKN-1, a key determinant of endo-mesoderm fates. RNAi screens for pos-1 suppressors identified genes encoding the cytoplasmic poly(A)-polymerase homolog GLD-2, the Bicaudal-C homolog GLD-3, and the protein NEG-1. We show that NEG-1 localizes in anterior nuclei, where it negatively regulates endo-mesoderm fates. In posterior cells, POS-1 binds the neg-1 3' UTR to oppose GLD-2 and GLD-3 activities that promote NEG-1 expression and cytoplasmic lengthening of the neg-1 mRNA poly(A) tail. Our findings uncover an intricate series of post-transcriptional regulatory interactions that, together, achieve precise spatial expression of endo-mesoderm fates in C. elegans embryos.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsCell DifferentiationCytoplasmGene Expression Regulation, DevelopmentalGerm CellsMesodermNuclear ProteinsPolyadenylationRNA-Binding ProteinsRNA, HelminthRNA, MessengerCaenorhabditis elegans ProteinsCarrier ProteinsNEG-1 protein, C elegansNuclear ProteinsPOS-1 protein, C elegansRNA-Binding ProteinsRNA, HelminthRNA, Messenger

Identifiers

PMID26096734
PMCPMC4507413
OpenAlexW1542762360

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.