Evidence map›Paper›PMID 26096031›Full record

ArticleReproductive biomedicine online2015

FISH and array CGH characterization of de novo derivative Y chromosome (Yq duplication and partial Yp deletion) in an azoospermic male.

Ewa Wiland, Alexander N Yatsenko, Archana Kishore, Halina Stanczak, Agata Zdarta, Marcin Ligaj, Marta Olszewska, Jan Karol Wolski, Maciej Kurpisz

Open access · greenAbstract read
In one paragraph

Article in Reproductive biomedicine online, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Ewa WilandDepartment of Reproductive Biology and Stem Cells, Institute of Human Genetics Polish Academy of Sciences, Poznan, Poland.
Alexander N YatsenkoDepartment of OBGYN and Reproductive Science, School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Archana KishoreDepartment of OBGYN and Reproductive Science, School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Halina Stanczak'nOvum' Fertility Clinic, Warszawa, Poland.
Agata ZdartaDepartment of Reproductive Biology and Stem Cells, Institute of Human Genetics Polish Academy of Sciences, Poznan, Poland.
Marcin LigajPathology Department, Maria Sklodowska Curie, Memorial Cancer Hospital, Warsaw, Poland.
Marta OlszewskaDepartment of Reproductive Biology and Stem Cells, Institute of Human Genetics Polish Academy of Sciences, Poznan, Poland.
Jan Karol Wolski'nOvum' Fertility Clinic, Warszawa, Poland; Urooncology Department, Maria Skłodowska Curie, Memorial Cancer Hospital, Warsaw, Poland.
Maciej KurpiszDepartment of Reproductive Biology and Stem Cells, Institute of Human Genetics Polish Academy of Sciences, Poznan, Poland. Electronic address: kurpimac@man.poznan.pl.
Institute of Human Genetics · PLThe Maria Sklodowska-Curie National Research Institute of Oncology · PLUniversity of Pittsburgh · USIVI Middle East Fertility Clinic · AE

Funding

Genetic Basis of Oligozoospermia in Infertile MalesK08HD058073 · NICHD · MAGEE-WOMEN'S RES INST AND FOUNDATION · PI YATSENKO, ALEXANDER N · 2010 to 2014
$625k
Genomic signatures of X-linked and autosomal candidate-genes in azoospermiaR21HD080755 · NICHD · MAGEE-WOMEN'S RES INST AND FOUNDATION · PI YATSENKO, ALEXANDER N · 2015 to 2016
$448k
NICHD NIH HHS HD058073NICHD NIH HHS K08 HD058073NICHD NIH HHS R21 HD080755
6 · The paper itself

Abstract

This study presents a 28-year-old infertile male who was referred to the cytogenetic laboratory for chromosomal analysis after 4 years of regular unprotected intercourse in whom non-obstructive azoospermia was revealed. Standard cytogenetic G-banding was performed on metaphase spreads and a de-novo karyotype 46,X,der(Y)(q11.22;p11.3) was identified. This analysis was followed by flourescence in-situ hybridization(FISH) and array comparative genomic hybridization (aCGH). Finally, the patient's karyotype was identified as 46,X,der(Y)(qter→q11.221::p11.31→qter).ish der(Y) (qter+,pter-,SHOX+,SRY+,Ycen+,DYZ3+;DYZ1+,qter+).arrYq11.221q12(14,448,863-59,288,511) x2, Yp11.32p11.31(104,062-266,388) x0. It is proposed that de-novo derivative monocentric Y chromosome with duplicated region Y qter→q11.221::p11.31→qter with partial deletion of Yp PAR1 region most probably can perturb the conjugation of sex chromosomes during first meiotic division of spermatogenic arrested differentiation (development).

Indexed as

Chromosome DeletionChromosome DuplicationChromosomes, Human, YAdultAzoospermiaComparative Genomic HybridizationHumansIn Situ Hybridization, FluorescenceMaleaCGHazoospermiader(Y)FISHintrachromosomal duplication and translocationpseudoisomonocentric

Identifiers

PMID26096031
PMCPMC4758203
OpenAlexW1544884122

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.