Evidence map›Paper›PMID 26095399›Full record

ArticleAnalytical biochemistry2015

Förster resonance energy transfer-based cholesterolysis assay identifies a novel hedgehog inhibitor.

Timothy S Owen, George Ngoje, Travis J Lageman, Brandon M Bordeau, Marlene Belfort, Brian P Callahan

Abstract readValidation Study
In one paragraph

Article in Analytical biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Enzyme Fragment Complementation Driven by Nucleic Acid Hybridization.bioRxiv : the preprint server for biology · 2023
    Article
  5. There's more to enzyme antagonism than inhibition.Bioorganic & medicinal chemistry · 2023
    Review
  6. Article
  7. Calcimycin InhibitsACS infectious diseases · 2022
    Article
  8. Article
  9. Inteins as Drug Targets and Therapeutic Tools.Frontiers in molecular biosciences · 2022
    Review
  10. Review
  11. Small-molecule inhibitors for the Prp8 intein as antifungal agents.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Timothy S OwenDepartment of Chemistry, Binghamton University, Binghamton, NY 13902, USA.
George NgojeDepartment of Chemistry, Binghamton University, Binghamton, NY 13902, USA.
Travis J LagemanDepartment of Chemistry, Binghamton University, Binghamton, NY 13902, USA.
Brandon M BordeauDepartment of Chemistry, Binghamton University, Binghamton, NY 13902, USA.
Marlene BelfortDepartment of Biological Sciences and The RNA Institute, University at Albany, State University of New York, Albany, NY 12222, USA.
Brian P CallahanDepartment of Chemistry, Binghamton University, Binghamton, NY 13902, USA. Electronic address: callahan@binghamton.edu.

Funding

SELF-SPLICING INTEINS: FUNCTION, EVOLUTION, APPLICATIONR01GM044844 · NIGMS · WADSWORTH CENTER · PI BELFORT, MARLENE · 1990 to 2019
$8.9M
NIGMS NIH HHS R01 GM04484NIGMS NIH HHS R01 GM044844
6 · The paper itself

Abstract

Hedgehog (Hh) proteins function in cell/cell signaling processes linked to human embryo development and the progression of several types of cancer. Here, we describe an optical assay of hedgehog cholesterolysis, a unique autoprocessing event critical for Hh function. The assay uses a recombinant Förster resonance energy transfer (FRET)-active Hh precursor whose cholesterolysis can be monitored continuously in multi-well plates (dynamic range=4, Z'=0.7), offering advantages in throughput over conventional sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) assays. Application of the optical assay in a pilot small molecule screen produced a novel cholesterolysis inhibitor (apparent IC50=5×10(-6)M) that appears to inactivate hedgehog covalently by a substitution nucleophilic aromatic (SNAr) mechanism.

Indexed as

High-Throughput Screening AssaysAmino Acid MotifsAnimalsAntineoplastic AgentsCholesterolConserved SequenceDrosophila melanogasterDrosophila ProteinsFluorescence Resonance Energy TransferHedgehog ProteinsKineticsLuminescent ProteinsNitrobenzoatesPeptide FragmentsPilot ProjectsPoint MutationAntineoplastic AgentsCholesterolDHH protein, humanDrosophila ProteinsHedgehog ProteinsLuminescent ProteinsNitrobenzoatesPeptide FragmentsProtein PrecursorsRecombinant Fusion ProteinsShh protein, DrosophilaSHH protein, humanSmall Molecule LibrariesST044643TetrazolesCancerFluorescenceFRETHedgehog proteinProtein engineeringSmall molecule screening

Identifiers

PMID26095399
PMCPMC4591182

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.