Evidence map›Paper›PMID 26092695›Full record

ArticleNucleic acids research2015

The eIF3 complex of Leishmania-subunit composition and mode of recruitment to different cap-binding complexes.

Shimi Meleppattu, Dikla Kamus-Elimeleh, Alexandra Zinoviev, Shahar Cohen-Mor, Irit Orr, Michal Shapira

Abstract read
In one paragraph

Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Tropical medicine and infectious disease · 2023
    Article
  5. LeishIF3d is a non-canonical cap-binding protein inFrontiers in molecular biosciences · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. eIF4E and Interactors from Unicellular Eukaryotes.International journal of molecular sciences · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. The eIF3 complex ofRNA (New York, N.Y.) · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shimi MeleppattuDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Dikla Kamus-ElimelehDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Alexandra ZinovievDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Shahar Cohen-MorDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Irit OrrDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Michal ShapiraDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva, Israel shapiram@bgu.ac.il.

Funding

The translation apparatus of Leishmania: from basic analysis to pursuit of novelR01AI108718 · NIAID · HARVARD MEDICAL SCHOOL · PI WAGNER, GERHARD · 2014 to 2017
$1.4M
800 MHz Triple Resonance Observe (TXO) Detection CryoProbeS10RR026417 · NCRR · HARVARD MEDICAL SCHOOL · PI WAGNER, GERHARD · 2010 to 2010
$359k
NCRR NIH HHS S10 RR026417NIAID NIH HHS R01-AI08718NIAID NIH HHS R01 AI108718
6 · The paper itself

Abstract

Eukaryotic initiation factor 3 (eIF3) is a multi-protein complex and a key participant in the assembly of the translation initiation machinery. In mammals, eIF3 comprises 13 subunits, most of which are characterized by conserved structural domains. The trypanosomatid eIF3 subunits are poorly conserved. Here, we identify 12 subunits that comprise the Leishmania eIF3 complex (LeishIF3a-l) by combining bioinformatics with affinity purification and mass spectrometry analyses. These results highlight the strong association of LeishIF3 with LeishIF1, LeishIF2 and LeishIF5, suggesting the existence of a multi-factor complex. In trypanosomatids, the translation machinery is tightly regulated in the different life stages of these organisms as part of their adaptation and survival in changing environments. We, therefore, addressed the mechanism by which LeishIF3 is recruited to different mRNA cap-binding complexes. A direct interaction was observed in vitro between the fully assembled LeishIF3 complex and recombinant LeishIF4G3, the canonical scaffolding protein of the cap-binding complex in Leishmania promastigotes. We further highlight a novel interaction between the C-terminus of LeishIF3a and LeishIF4E1, the only cap-binding protein that efficiently binds the cap structure under heat shock conditions, anchoring a complex that is deficient of any MIF4G-based scaffolding subunit.

Indexed as

Peptide Chain Initiation, TranslationalComputational BiologyEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4FLeishmania mexicanaProtein SubunitsProtozoan ProteinsEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4FProtein SubunitsProtozoan Proteins

Identifiers

PMID26092695
PMCPMC4513851

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.