Evidence map›Paper›PMID 26091847›Full record

ArticleBMC genetics2015

Genetic polymorphisms of pharmacogenomic VIP variants in the Uygur population from northwestern China.

Li Wang, Ainiwaer Aikemu, Ayiguli Yibulayin, Shuli Du, Tingting Geng, Bo Wang, Yuan Zhang, Tianbo Jin, Jie Yang

Abstract read
In one paragraph

Article in BMC genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Li WangKey Laboratory of High Altitude Environment and Genes Related to Diseases of Tibet Autonomous Region, School of Medicine, Xizang Minzu University, Xianyang, Shaanxi, 712082, China. Li_wangprof@163.com.
Ainiwaer AikemuDepartment of Drug Analysis, Faculty of Pharmacy, Xinjiang Medical University, Urumqi, 830054, China. Ainiwaer_Aikemu@163.com.
Ayiguli YibulayinDepartment of radiotherapy two, The people's hospital of Xinjiang Uygur Autonomous Region, #91 Tianchi Road, Urumqi, 830001, , Xinjiang, China. Ayiguli_Yibulayin@163.com.
Shuli DuSchool of Life Sciences, Northwest University, Mailbox 386, #229 North Taibai Road, Xi'an, 710069, , Shaanxi, China. Shuli_du@163.com.
Tingting GengNational Engineering Research Center for Miniaturized Detection Systems, Xi'an, 710069, China. gengttlife@163.com.
Bo WangNational Engineering Research Center for Miniaturized Detection Systems, Xi'an, 710069, China. wangbo_life@163.com.
Yuan ZhangNational Engineering Research Center for Miniaturized Detection Systems, Xi'an, 710069, China. zhangyuan_life@163.com.
Tianbo JinKey Laboratory of High Altitude Environment and Genes Related to Diseases of Tibet Autonomous Region, School of Medicine, Xizang Minzu University, Xianyang, Shaanxi, 712082, China. jintianboNW@163.com.
Jie YangDepartment of radiotherapy two, The people's hospital of Xinjiang Uygur Autonomous Region, #91 Tianchi Road, Urumqi, 830001, , Xinjiang, China. 13579879118@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDrug response variability observed amongst patients is caused by the interaction of both genetic and non-genetic factors, and frequencies of functional genetic variants are known to vary amongst populations. Pharmacogenomic research has the potential to help with individualized treatments. We have not found any pharmacogenomics information regarding Uygur ethnic group in northwest China. In the present study, we genotyped 85 very important pharmacogenetic (VIP) variants (selected from the PharmGKB database) in the Uygur population and compared our data with other eleven populations from the HapMap data set.

resultsThrough statistical analysis, we found that CYP3A5 rs776746, VKORC1 rs9934438, and VKORC1 rs7294 were most different in Uygur compared with most of the eleven populations from the HapMap data set. Compared with East Asia populations, allele A of rs776746 is less frequent and allele A of rs7294 is more frequent in the Uygur population. The analysis of F-statistics (Fst) and population structure shows that the genetic background of Uygur is relatively close to that of MEX.

conclusionsOur results show significant differences amongst Chinese populations that will help clinicians triage patients for better individualized treatments.

Indexed as

PharmacogeneticsPolymorphism, Single NucleotideAllelesBayes TheoremChinaCluster AnalysisDatabases, GeneticEthnicityGene FrequencyGenetics, PopulationGenotypeHumans

Identifiers

PMID26091847
PMCPMC4475291

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.