Evidence map›Paper›PMID 26091693›Full record

ArticleThe Plant cell2015

GAP Activity, but Not Subcellular Targeting, Is Required for Arabidopsis RanGAP Cellular and Developmental Functions.

Joanna Boruc, Anna H N Griffis, Thushani Rodrigo-Peiris, Xiao Zhou, Bailey Tilford, Daniël Van Damme, Iris Meier

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Joanna BorucDepartment of Molecular Genetics, The Ohio State University, Columbus, Ohio 43210.
Anna H N GriffisDepartment of Molecular Genetics, The Ohio State University, Columbus, Ohio 43210 Center for RNA Biology, The Ohio State University, Columbus, Ohio 43210.
Thushani Rodrigo-PeirisDepartment of Molecular Genetics, The Ohio State University, Columbus, Ohio 43210.
Xiao ZhouDepartment of Molecular Genetics, The Ohio State University, Columbus, Ohio 43210.
Bailey TilfordDepartment of Molecular Genetics, The Ohio State University, Columbus, Ohio 43210.
Daniël Van DammeDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Iris MeierDepartment of Molecular Genetics, The Ohio State University, Columbus, Ohio 43210 Center for RNA Biology, The Ohio State University, Columbus, Ohio 43210 meier.56@osu.edu.
The Ohio State University · USGhent University · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Ran GTPase activating protein (RanGAP) is important to Ran signaling involved in nucleocytoplasmic transport, spindle organization, and postmitotic nuclear assembly. Unlike vertebrate and yeast RanGAP, plant RanGAP has an N-terminal WPP domain, required for nuclear envelope association and several mitotic locations of Arabidopsis thaliana RanGAP1. A double null mutant of the two Arabidopsis RanGAP homologs is gametophyte lethal. Here, we created a series of mutants with various reductions in RanGAP levels by combining a RanGAP1 null allele with different RanGAP2 alleles. As RanGAP level decreases, the severity of developmental phenotypes increases, but nuclear import is unaffected. To dissect whether the GAP activity and/or the subcellular localization of RanGAP are responsible for the observed phenotypes, this series of rangap mutants were transformed with RanGAP1 variants carrying point mutations abolishing the GAP activity and/or the WPP-dependent subcellular localization. The data show that plant development is differentially affected by RanGAP mutant allele combinations of increasing severity and requires the GAP activity of RanGAP, while the subcellular positioning of RanGAP is dispensable. In addition, our results indicate that nucleocytoplasmic trafficking can tolerate both partial depletion of RanGAP and delocalization of RanGAP from the nuclear envelope.

Indexed as

AllelesAmino Acid SubstitutionArabidopsisArabidopsis ProteinsGene Knockdown TechniquesGenotypeGTPase-Activating ProteinsMutationNuclear EnvelopeNuclear ProteinsOvulePhenotypeSeedlingsSubcellular FractionsArabidopsis ProteinsAT3G63130 protein, ArabidopsisGTPase-Activating ProteinsNuclear Proteins

Identifiers

PMID26091693
PMCPMC4531347
OpenAlexW2132413056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.