Evidence map›Paper›PMID 26091292›Full record

ArticlePloS one2015

Efficient Detection of Pathogenic Leptospires Using 16S Ribosomal RNA.

Brian T Backstedt, Ozlem Buyuktanir, Janet Lindow, Elsio A Wunder, Mitermayer G Reis, Sahar Usmani-Brown, Michel Ledizet, Albert Ko, Utpal Pal

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
2.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it, 49 citations in OpenAlex.

  1. Pooled it
  2. Nucleic acid and antigen detection tests for leptospirosis.The Cochrane database of systematic reviews · 2019
    Pooled it
  3. Trial
  4. Article
  5. Diagnostic Performance of Two Commercial qPCR Kits forTropical medicine and infectious disease · 2026
    Article
  6. Retrospective Molecular Detection and Characterization of PathogenicTropical medicine and infectious disease · 2026
    Article
  7. Laboratory Diagnosis of Leptospirosis.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  8. Article
  9. Article
  10. Article
  11. Comparative Genome Analysis of 25 Sri LankanEvolutionary bioinformatics online · 2025
    Article
  12. Prevalence of PathogenicPathogens (Basel, Switzerland) · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Ultrasensitive Detection ofInternational journal of molecular sciences · 2021
    Article
  19. Highly multiplexed oligonucleotide probe-ligation testing enables efficient extraction-free SARS-CoV-2 detection and viral genotyping.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Brian T BackstedtDepartment of Veterinary Medicine and Virginia-Maryland Regional College of Veterinary Medicine, University of Maryland, College Park, Maryland, United States of America.
Ozlem BuyuktanirDepartment of Veterinary Medicine and Virginia-Maryland Regional College of Veterinary Medicine, University of Maryland, College Park, Maryland, United States of America.
Janet LindowDepartment of Epidemiology of Microbial Diseases, Yale University School of Public Health, New Haven, Connecticut, United States of America; Centro de Pesquisas Gonçalo Moniz, Fundação Oswaldo Cruz, Salvador, Brazil.
Elsio A WunderDepartment of Epidemiology of Microbial Diseases, Yale University School of Public Health, New Haven, Connecticut, United States of America.
Mitermayer G ReisCentro de Pesquisas Gonçalo Moniz, Fundação Oswaldo Cruz, Salvador, Brazil.
Sahar Usmani-BrownL2 Diagnostics, New Haven, Connecticut, United States of America.
Michel LedizetL2 Diagnostics, New Haven, Connecticut, United States of America.
Albert KoDepartment of Epidemiology of Microbial Diseases, Yale University School of Public Health, New Haven, Connecticut, United States of America; Centro de Pesquisas Gonçalo Moniz, Fundação Oswaldo Cruz, Salvador, Brazil.
Utpal PalDepartment of Veterinary Medicine and Virginia-Maryland Regional College of Veterinary Medicine, University of Maryland, College Park, Maryland, United States of America.
Virginia–Maryland College of Veterinary Medicine · USFundação Oswaldo Cruz · BRYale University · US

Funding

Research Mentoring and Building Capacity of underrepresented Minority Research Scientists in India.D43TW010540 · FIC · YALE UNIVERSITY · PI MICHELE BARRY, Eva Harris · 2017 to 2026
$15.5M
Global Health Fellows and Scholars Research TrainingR25TW009338 · FIC · UNIVERSITY OF CALIFORNIA BERKELEY · PI BARRY, MICHELE, KO, ALBERT ICKSANG · 2012 to 2016
$5.2M
Disease Determinants of Urban LeptospirosisU01AI088752 · NIAID · YALE UNIVERSITY · PI KO, ALBERT ICKSANG · 2010 to 2014
$3.6M
Natural History of Urban LeptospirosisR01AI052473 · NIAID · YALE UNIVERSITY · PI KO, ALBERT ICKSANG · 2003 to 2013
$2.8M
Ecoepidemiology of leptospirosis in the urban slums of BrazilR01TW009504 · FIC · YALE UNIVERSITY · PI BEGON, MICHAEL, CHILDS, JAMES EMORY · 2012 to 2016
$2.2M
RNA Detection as an Improved Diagnostic Assay for Human LeptospirosisR41AI114064 · NIAID · L2 DIAGNOSTICS, LLC · PI KO, ALBERT ICKSANG, LEDIZET, MICHEL · 2014 to 2015
$600k
FIC NIH HHS D43 TW010540FIC NIH HHS R01 TW009504FIC NIH HHS TW009504NIAID NIH HHS 1R43AI114064-01NIAID NIH HHS AI052473NIAID NIH HHS AI088752NIAID NIH HHS AI114064-01NIAID NIH HHS R01 AI052473NIAID NIH HHS R41 AI114064NIAID NIH HHS U01 AI088752
6 · The paper itself

Abstract

Pathogenic Leptospira species cause a prevalent yet neglected zoonotic disease with mild to life-threatening complications in a variety of susceptible animals and humans. Diagnosis of leptospirosis, which primarily relies on antiquated serotyping methods, is particularly challenging due to presentation of non-specific symptoms shared by other febrile illnesses, often leading to misdiagnosis. Initiation of antimicrobial therapy during early infection to prevent more serious complications of disseminated infection is often not performed because of a lack of efficient diagnostic tests. Here we report that specific regions of leptospiral 16S ribosomal RNA molecules constitute a novel and efficient diagnostic target for PCR-based detection of pathogenic Leptospira serovars. Our diagnostic test using spiked human blood was at least 100-fold more sensitive than corresponding leptospiral DNA-based quantitative PCR assays, targeting the same 16S nucleotide sequence in the RNA and DNA molecules. The sensitivity and specificity of our RNA assay against laboratory-confirmed human leptospirosis clinical samples were 64% and 100%, respectively, which was superior then an established parallel DNA detection assay. Remarkably, we discovered that 16S transcripts remain appreciably stable ex vivo, including untreated and stored human blood samples, further highlighting their use for clinical detection of L. interrogans. Together, these studies underscore a novel utility of RNA targets, specifically 16S rRNA, for development of PCR-based modalities for diagnosis of human leptospirosis, and also may serve as paradigm for detection of additional bacterial pathogens for which early diagnosis is warranted.

Indexed as

RNA, BacterialRNA, Ribosomal, 16SAnimalsCricetinaeDisease Models, AnimalHumansLeptospiraLeptospirosisReal-Time Polymerase Chain ReactionSensitivity and SpecificityRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID26091292
PMCPMC4474562
OpenAlexW1495820970

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.