Evidence map›Paper›PMID 26091106›Full record

ArticlePloS one2015

Asian Citrus Psyllid Expression Profiles Suggest Candidatus Liberibacter Asiaticus-Mediated Alteration of Adult Nutrition and Metabolism, and of Nymphal Development and Immunity.

Meenal Vyas, Tonja W Fisher, Ruifeng He, William Nelson, Guohua Yin, Joseph M Cicero, Mark Willer, Ryan Kim, Robin Kramer, Greg A May and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
16.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Detection ofFrontiers in plant science · 2024
    Article
  7. The plant pathogenic bacteriumMicrobiology spectrum · 2023
    Article
  8. Interaction between the flagellum ofFrontiers in microbiology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Metabolic changes and potential biomarkers in "Frontiers in plant science · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Meenal VyasSchool of Plant Sciences, The University of Arizona, Tucson, Arizona, United States of America.
Tonja W FisherSchool of Plant Sciences, The University of Arizona, Tucson, Arizona, United States of America.
Ruifeng HeInstitute of Biological Chemistry, Washington State University, Pullman, Washington, United States of America.
William NelsonBIO5, The University of Arizona, Tucson, Arizona, United States of America.
Guohua YinSchool of Plant Sciences, The University of Arizona, Tucson, Arizona, United States of America.
Joseph M CiceroSchool of Plant Sciences, The University of Arizona, Tucson, Arizona, United States of America.
Mark WillerBIO5, The University of Arizona, Tucson, Arizona, United States of America.
Ryan KimNational Center for Genome Resources, Santa Fe, New Mexico, United States of America.
Robin KramerNational Center for Genome Resources, Santa Fe, New Mexico, United States of America.
Greg A MayNational Center for Genome Resources, Santa Fe, New Mexico, United States of America.
John A CrowNational Center for Genome Resources, Santa Fe, New Mexico, United States of America.
Carol A SoderlundBIO5, The University of Arizona, Tucson, Arizona, United States of America.
David R GangInstitute of Biological Chemistry, Washington State University, Pullman, Washington, United States of America.
Judith K BrownSchool of Plant Sciences, The University of Arizona, Tucson, Arizona, United States of America.
University of Arizona · USNational Center for Genome Resources · USWashington State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Asian citrus psyllid (ACP) Diaphorina citri Kuwayama (Hemiptera: Psyllidae) is the insect vector of the fastidious bacterium Candidatus Liberibacter asiaticus (CLas), the causal agent of citrus greening disease, or Huanglongbing (HLB). The widespread invasiveness of the psyllid vector and HLB in citrus trees worldwide has underscored the need for non-traditional approaches to manage the disease. One tenable solution is through the deployment of RNA interference technology to silence protein-protein interactions essential for ACP-mediated CLas invasion and transmission. To identify psyllid interactor-bacterial effector combinations associated with psyllid-CLas interactions, cDNA libraries were constructed from CLas-infected and CLas-free ACP adults and nymphs, and analyzed for differential expression. Library assemblies comprised 24,039,255 reads and yielded 45,976 consensus contigs. They were annotated (UniProt), classified using Gene Ontology, and subjected to in silico expression analyses using the Transcriptome Computational Workbench (TCW) (http://www.sohomoptera.org/ACPPoP/). Functional-biological pathway interpretations were carried out using the Kyoto Encyclopedia of Genes and Genomes databases. Differentially expressed contigs in adults and/or nymphs represented genes and/or metabolic/pathogenesis pathways involved in adhesion, biofilm formation, development-related, immunity, nutrition, stress, and virulence. Notably, contigs involved in gene silencing and transposon-related responses were documented in a psyllid for the first time. This is the first comparative transcriptomic analysis of ACP adults and nymphs infected and uninfected with CLas. The results provide key initial insights into host-parasite interactions involving CLas effectors that contribute to invasion-virulence, and to host nutritional exploitation and immune-related responses that appear to be essential for successful ACP-mediated circulative, propagative CLas transmission.

Indexed as

Animal Nutritional Physiological PhenomenaAnimalsCitrusContig MappingDNA Transposable ElementsGene Expression Regulation, DevelopmentalGene OntologyGenes, InsectHemipteraHost-Pathogen InteractionsImmunity, InnateInsect VectorsMolecular Sequence AnnotationNymphPlant DiseasesRhizobiaceaeDNA Transposable Elements

Identifiers

PMID26091106
PMCPMC4474670
OpenAlexW1523809550

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.