Evidence map›Paper›PMID 26090379›Full record

ArticleBioMed research international2015

MALDI-TOF Mass Array Analysis of Nell-1 Promoter Methylation Patterns in Human Gastric Cancer.

Changlu Gao, Qian Zhang, Deyang Kong, Di Wu, Changlei Su, Jinxue Tong, Feng Chen, Qifan Zhang

Abstract read
In one paragraph

Article in BioMed research international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. NELL-1: role and mechanisms in disease pathogenesis and development.Frontiers in cell and developmental biology · 2026
    Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Changlu GaoDepartment of Surgical Oncology, The Fourth Hospital of Harbin Medical University, Harbin 150010, China.
Qian ZhangCentral Laboratory, School of Stomatology, Peking University, Beijing 100081, China.
Deyang KongDepartment of Nephrology, First Affiliated Hospital of Harbin Medical University, Harbin 150010, China.
Di WuDepartment of Surgical Oncology, The Fourth Hospital of Harbin Medical University, Harbin 150010, China.
Changlei SuDepartment of Surgical Oncology, The Fourth Hospital of Harbin Medical University, Harbin 150010, China.
Jinxue TongDepartment of Surgical Oncology, The Fourth Hospital of Harbin Medical University, Harbin 150010, China.
Feng ChenCentral Laboratory, School of Stomatology, Peking University, Beijing 100081, China.
Qifan ZhangDepartment of Surgical Oncology, The Fourth Hospital of Harbin Medical University, Harbin 150010, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mass spectrometry (MS) enables rapid and sensitive qualitative and quantitative analyses of biomolecules (proteins, peptides, oligosaccharides, lipids, DNA, and RNA), drugs, and metabolites. MS has become an essential tool in modern biomedical research, including the analysis of DNA methylation. DNA methylation has been reported in many cancers, suggesting that it can be utilized as an early biomarker to improve the early diagnosis rate. Using matrix-assisted laser desorption/ionization time-of-flight MS and MassCLEAVE reagent, we compared Nell-1 hypermethylation levels among tumor tissues, paracarcinoma tissues, and normal tissues from gastric cancer patients. Almost 80% of the CpG sites in the amplicons produced were covered by the analysis. Our results indicate a significant difference in methylation status between gastric cancer tissue (a higher level) and normal tissue. The same trend was identified in gastric cancer tissue versus paracarcinoma tissue. We also detected lower relative expression of Nell-1 by real-time PCR. Furthermore, immunohistochemical analyses revealed that Nell-1 staining was less intense in cancer tissue relative to normal tissue and that the tumor cells had spread to the muscle layer. These findings may serve as a guide for the early diagnosis of gastric cancer.

Indexed as

AgedCalcium-Binding ProteinsDNA MethylationFemaleHumansMaleMiddle AgedNerve Tissue ProteinsPromoter Regions, GeneticSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationStomach NeoplasmsCalcium-Binding ProteinsNELL1 protein, humanNerve Tissue Proteins

Identifiers

PMID26090379
PMCPMC4452250

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.