Evidence map›Paper›PMID 26089742›Full record

ArticleArchaea (Vancouver, B.C.)2015

Isolation and Molecular Identification of Auxotrophic Mutants to Develop a Genetic Manipulation System for the Haloarchaeon Natrinema sp. J7-2.

Jie Lv, Shuai Wang, Yuchen Wang, Yuping Huang, Xiangdong Chen

Abstract read
In one paragraph

Article in Archaea (Vancouver, B.C.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Metabolic and genetic basis for auxotrophies in Gram-negative species.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jie LvState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan 430072, China ; Henan Academy of Medical and Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 450052, China.
Shuai WangState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Yuchen WangState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Yuping HuangState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Xiangdong ChenState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan 430072, China ; Hubei Provincial Cooperative Innovation Center of Industrial Fermentation, Wuhan 430072, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our understanding of the genus Natrinema is presently limited due to the lack of available genetic tools. Auxotrophic markers have been widely used to construct genetic systems in bacteria and eukaryotes and in some archaeal species. Here, we isolated four auxotrophic mutants of Natrinema sp. J7-2, via 1-methyl-3-nitro-1-nitroso-guanidin mutagenesis, and designated them as J7-2-1, J7-2-22, J7-2-26, and J7-2-52, respectively. The mutant phenotypes were determined to be auxotrophic for leucine (J7-2-1), arginine (J7-2-22 and J7-2-52), and lysine (J7-2-26). The complete genome and the biosynthetic pathways of amino acids in J7-2 identified that the auxotrophic phenotype of three mutants was due to gene mutations in leuB (J7-2-1), dapD (J7-2-26), and argC (J7-2-52). These auxotrophic phenotypes were employed as selectable makers to establish a transformation method. The transformation efficiencies were determined to be approximately 10(3) transformants per µg DNA. And strains J7-2-1 and J7-2-26 were transformed into prototrophic strains with the wild type genomic DNA, amplified fragments of the corresponding genes, or the integrative plasmids carrying the corresponding genes. Additionally, exogenous genes, bgaH or amyH gene, were expressed successfully in J7-2-1. Thus, we have developed a genetic manipulation system for the Natrinema genus based on the isolated auxotrophic mutants of Natrinema sp. J7-2.

Indexed as

MutationArginineBiosynthetic PathwaysEuryarchaeotaGene ExpressionGenetics, MicrobialGenome, ArchaealLeucineLysineMutagenesisSelection, GeneticSequence Analysis, DNATransformation, GeneticArginineLeucineLysine

Identifiers

PMID26089742
PMCPMC4454726

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.