Evidence map›Paper›PMID 26086868›Full record

ArticlePloS one2015

Multi-Organ Contribution to the Metabolic Plasma Profile Using Hierarchical Modelling.

Frida Torell, Kate Bennett, Silvia Cereghini, Stefan Rännar, Katrin Lundstedt-Enkel, Thomas Moritz, Cecile Haumaitre, Johan Trygg, Torbjörn Lundstedt

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

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  11. Dietary Probiotic Effect ofFrontiers in microbiology · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Frida TorellComputational Life Science Cluster (CLiC), Department of Chemistry, Umeå University, Umeå, Sweden; Karlsruhe Institute of Technology, Karlsruhe, Germany.
Kate BennettAcureOmics AB, Umeå, Sweden.
Silvia CereghiniCNRS, UMR7622, 75005, Paris, France; Sorbonne Universités, UPMC, UMR7622, 75005, Paris, France; Inserm U-1156, Paris, France.
Stefan RännarAcureOmics AB, Umeå, Sweden.
Katrin Lundstedt-EnkelAcureOmics AB, Umeå, Sweden.
Thomas MoritzAcureOmics AB, Umeå, Sweden.
Cecile HaumaitreCNRS, UMR7622, 75005, Paris, France; Sorbonne Universités, UPMC, UMR7622, 75005, Paris, France; Inserm U-1156, Paris, France.
Johan TryggComputational Life Science Cluster (CLiC), Department of Chemistry, Umeå University, Umeå, Sweden.
Torbjörn LundstedtAcureOmics AB, Umeå, Sweden.
Umeå University · SECentre National de la Recherche Scientifique · FRKarlsruhe Institute of Technology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hierarchical modelling was applied in order to identify the organs that contribute to the levels of metabolites in plasma. Plasma and organ samples from gut, kidney, liver, muscle and pancreas were obtained from mice. The samples were analysed using gas chromatography time-of-flight mass spectrometry (GC TOF-MS) at the Swedish Metabolomics centre, Umeå University, Sweden. The multivariate analysis was performed by means of principal component analysis (PCA) and orthogonal projections to latent structures (OPLS). The main goal of this study was to investigate how each organ contributes to the metabolic plasma profile. This was performed using hierarchical modelling. Each organ was found to have a unique metabolic profile. The hierarchical modelling showed that the gut, kidney and liver demonstrated the greatest contribution to the metabolic pattern of plasma. For example, we found that metabolites were absorbed in the gut and transported to the plasma. The kidneys excrete branched chain amino acids (BCAAs) and fatty acids are transported in the plasma to the muscles and liver. Lactic acid was also found to be transported from the pancreas to plasma. The results indicated that hierarchical modelling can be utilized to identify the organ contribution of unknown metabolites to the metabolic profile of plasma.

Indexed as

MetabolomeModels, TheoreticalAnimalsGas Chromatography-Mass SpectrometryGastrointestinal TractKidneyLiverMetabolomicsMiceMuscle, SkeletalPancreas

Identifiers

PMID26086868
PMCPMC4472231
OpenAlexW2106510364

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.