ArticleJournal of clinical microbiology2015
Whole-Genome Sequencing Data for Serotyping Escherichia coli-It's Time for a Change!
Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
12 citing papers in PubMed.
- Antimicrobial Susceptibility Profiles of Extended-Spectrum β-Lactamase-Producing Escherichia coli Isolated From Intensively Reared and Free-Range Chickens in Selected Districts of Zambia.Veterinary medicine and science · 2026Article
- Draft genome sequence of multidrug-resistantMicrobiology resource announcements · 2026Article
- Phenotypic and genotypic relationships between Shigella species and Escherichia coli O37:H10 isolates in Addis Ababa, Ethiopia.BMC research notes · 2025Article
- Genomic features, antimicrobial resistance and pathogenicity assessment of Escherichia coli serotype O177:H51 strain JS01 isolated from a diseased chicken.BMC microbiology · 2025Article
- GBS-SBG - GBS Serotyping by Genome Sequencing.Microbial genomics · 2021Article
- Genomic characterization of multidrug-resistant ESBL-producing Escherichia coli ST58 causing fatal colibacillosis in critically endangered Brazilian merganser (Mergus octosetaceus).Transboundary and emerging diseases · 2021Article
- Whole genome sequencing and metagenomics for outbreak investigation, source attribution and risk assessment of food-borne microorganisms.EFSA journal. European Food Safety Authority · 2019Article
- Whole-Genome-Based Public Health Surveillance of Less Common Shiga Toxin-Producing Escherichia coli Serovars and Untypeable Strains Identifies Four Novel O Genotypes.Journal of clinical microbiology · 2019Article
- Emergence and divergence of major lineages of Shiga-toxin-producing Escherichia coli in Australia.Microbial genomics · 2019Article
- Molecular Prediction of the O157:H-Negative Phenotype Prevalent in Australian Shiga Toxin-Producing Escherichia coli Cases Improves Concordance ofJournal of clinical microbiology · 2018Article
- Phylotyper: in silico predictor of gene subtypes.Bioinformatics (Oxford, England) · 2017Article
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1 author.
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No grant is acknowledged in the PubMed record.
Abstract
The accessibility of whole-genome sequencing (WGS) presents the opportunity for national reference laboratories to provide a state-of-the-art public health surveillance service. The replacement of traditional serology-based typing of Escherichia coli by WGS is supported by user-friendly, freely available data analysis Web tools. An article in this issue of the Journal of Clinical Microbiology (K. G. Joensen, A. M. M. Tetzschner, A. Iguchi, F. M. Aarestrup, and F. Scheutz, J Clin Microbiol, 53:2410-2426, 2015, http://dx.doi.org/10.1128/JCM.00008-15) describes SerotypeFinder, an essential guide to serotyping E. coli in the 21st century.
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