Evidence map›Paper›PMID 26084920›Full record

ArticlePlant physiology2015

Florigen-Encoding Genes of Day-Neutral and Photoperiod-Sensitive Maize Are Regulated by Different Chromatin Modifications at the Floral Transition.

Iride Mascheretti, Katie Turner, Roberta S Brivio, Andrew Hand, Joseph Colasanti, Vincenzo Rossi

Abstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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  5. Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Review
  7. Article
  8. Frontiers in plant science · 2023
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
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  15. Article
  16. Epigenomic landscape and epigenetic regulation in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Iride MascherettiConsiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria, Unità di Ricerca per la Maiscoltura, I-24126 Bergamo, Italy (I.M., R.S.B., V.R.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (K.T., A.H., J.C.).
Katie TurnerConsiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria, Unità di Ricerca per la Maiscoltura, I-24126 Bergamo, Italy (I.M., R.S.B., V.R.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (K.T., A.H., J.C.).
Roberta S BrivioConsiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria, Unità di Ricerca per la Maiscoltura, I-24126 Bergamo, Italy (I.M., R.S.B., V.R.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (K.T., A.H., J.C.).
Andrew HandConsiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria, Unità di Ricerca per la Maiscoltura, I-24126 Bergamo, Italy (I.M., R.S.B., V.R.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (K.T., A.H., J.C.).
Joseph ColasantiConsiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria, Unità di Ricerca per la Maiscoltura, I-24126 Bergamo, Italy (I.M., R.S.B., V.R.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (K.T., A.H., J.C.) jcolasan@uoguelph.ca vincenzo.rossi@entecra.it.ORCID http://orcid.org/0000-0002-3136-9594
Vincenzo RossiConsiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria, Unità di Ricerca per la Maiscoltura, I-24126 Bergamo, Italy (I.M., R.S.B., V.R.); andDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (K.T., A.H., J.C.) jcolasan@uoguelph.ca vincenzo.rossi@entecra.it.ORCID http://orcid.org/0000-0001-9746-2583

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The activity of the maize (Zea mays) florigen gene ZEA CENTRORADIALIS8 (ZCN8) is associated with the floral transition in both day-neutral temperate maize and short-day (SD)-requiring tropical maize. We analyzed transcription and chromatin modifications at the ZCN8 locus and its nearly identical paralog ZCN7 during the floral transition. This analysis was performed with day-neutral maize (Zea mays ssp. mays), where flowering is promoted almost exclusively via the autonomous pathway through the activity of the regulatory gene indeterminate1 (id1), and tropical teosinte (Zea mays ssp. parviglumis) under floral inductive and noninductive photoperiods. Comparison of ZCN7/ZCN8 histone modification profiles in immature leaves of nonflowering id1 mutants and teosinte grown under floral inhibitory photoperiods reveals that both id1 floral inductive activity and SD-mediated induction result in histone modification patterns that are compatible with the formation of transcriptionally competent chromatin environments. Specific histone modifications are maintained during leaf development and may represent a chromatin signature that favors the production of processed ZCN7/ZCN8 messenger RNA in florigen-producing mature leaf. However, whereas id1 function promotes histone H3 hyperacetylation, SD induction is associated with increased histone H3 dimethylation and trimethylation at lysine-4. In addition, id1 and SD differently affect the production of ZCN7/ZCN8 antisense transcript. These observations suggest that distinct mechanisms distinguish florigen regulation in response to autonomous and photoperiod pathways. Finally, the identical expression and histone modification profiles of ZCN7 and ZCN8 in response to floral induction suggest that ZCN7 may represent a second maize florigen.

Indexed as

Gene Expression Regulation, PlantHistone CodeChromatinFlorigenFlowersHistonesLightPhotoperiodPlant LeavesPlant ProteinsRNA, MessengerRNA, PlantTranscription FactorsZea maysChromatinFlorigenHistonesPlant ProteinsRNA, MessengerRNA, PlantTranscription Factors

Identifiers

PMID26084920
PMCPMC4528754

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.