Evidence map›Paper›PMID 26083474›Full record

Trial reportPloS one2015

Effects of Vaccination with 10-Valent Pneumococcal Non-Typeable Haemophilus influenza Protein D Conjugate Vaccine (PHiD-CV) on the Nasopharyngeal Microbiome of Kenyan Toddlers.

Leah M Feazel, Stephanie A Santorico, Charles E Robertson, Mahfudh Bashraheil, J Anthony G Scott, Daniel N Frank, Laura L Hammitt

Registry-linked trialOpen access · goldAbstract readRandomized Controlled Trial
In one paragraph

Trial report in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01028326 (Immunogenicity and Reactogenicity of 10-valent Pneumococcal Conjugate Vaccine), which is not on this map. Cited by 18 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 2 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01028326 phase4unknown statusnot on this map

Immunogenicity and Reactogenicity of 10-valent Pneumococcal Conjugate Vaccine (PCV10) in Children Aged 12-59 Months

TypeinterventionalSponsorKEMRI-Wellcome Trust Collaborative Research ProgramRan2010 to 2018Enrolled600ConditionsPneumococcal PneumoniaArmsPCV10 and DTaP, hepatitis A vaccine, DTaP, PCV10
3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 2 syntheses or guidelines pooled it, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Leah M FeazelDivision of Infectious Diseases, University of Colorado School of Medicine, Aurora, CO, United States of America.
Stephanie A SantoricoDept. of Mathematical & Statistical Sciences, University of Colorado Denver, Aurora, CO, United States of America.
Charles E RobertsonDept. of Molecular, Cellular, and Developmental Biology, University of Colorado Boulder, CO, United States of America.
Mahfudh BashraheilKEMRI-Wellcome Trust Research Programme, Centre for Geographic Medicine-Coast, Kilifi, Kenya.
J Anthony G ScottKEMRI-Wellcome Trust Research Programme, Centre for Geographic Medicine-Coast, Kilifi, Kenya; Nuffield Department of Clinical Medicine, University of Oxford, Oxford, United Kingdom; London School of Tropical Medicine and Hygiene, London, United Kingdom.
Daniel N FrankDivision of Infectious Diseases, University of Colorado School of Medicine, Aurora, CO, United States of America; University of Colorado Microbiome Research Consortium (MiRC), Aurora, CO, United States of America.
Laura L HammittKEMRI-Wellcome Trust Research Programme, Centre for Geographic Medicine-Coast, Kilifi, Kenya; Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, United States of America.
University of Colorado Denver · USKenya Medical Research Institute · KELondon School of Hygiene & Tropical Medicine · GBUniversity of Colorado Boulder · US

Funding

High Performance Validation and Classification of Metagenomic Ribosomal-RNA SequeR21HG005964 · NHGRI · UNIVERSITY OF COLORADO DENVER · PI FRANK, DANIEL N · 2010 to 2011
$456k
NHGRI NIH HHS R21 HG005964Wellcome Trust 092654Wellcome Trust 098532Wellcome Trust 100714
6 · The paper itself

Abstract

objectivePneumococcal conjugate vaccines reduce the prevalence of vaccine serotypes carried in the nasopharynx. Because this could alter carriage of other potential pathogens, we assessed the nasopharyngeal microbiome of children who had been vaccinated with 10-valent pneumococcal non-typeable Haemophilus influenzae protein-D conjugate vaccine (PHiD-CV).

methodsProfiles of the nasopharyngeal microbiota of 60 children aged 12-59 months, who had been randomized to receive 2 doses of PHiD-CV (n=30) or Hepatitis A vaccine (n=30) 60 days apart, were constructed by 16S rRNA gene pyrosequencing of swab specimens collected before vaccination and 180 days after dose 1.

resultsPrior to vaccination, Moraxella catarrhalis (median of 12.3% of sequences/subject), Streptococcus pneumoniae (4.4%) and Corynebacterium spp. (5.6%) were the most abundant nasopharyngeal bacterial species. Vaccination with PHiD-CV did not significantly alter the species composition, abundance, or prevalence of known pathogens. Distinct microbiomes were identified based on the abundances of Streptococcus, Moraxella, and Haemophilus species. These microbiomes shifted in composition over the study period and were independent of age, sex, school attendance, antibiotic exposure, and vaccination.

conclusionsVaccination of children with two doses of PHiD-CV did not significantly alter the nasopharyngeal microbiome. This suggests limited replacement carriage with pathogens other than non-vaccine strains of S. pneumoniae.

trial registrationclinicaltrials.gov NCT01028326.

Indexed as

Child, PreschoolCorynebacteriumFemaleHumansInfantKenyaMaleMicrobiotaMoraxella catarrhalisNasopharynxPneumococcal VaccinesRNA, Ribosomal, 16SSequence Analysis, DNAStreptococcus pneumoniaeVaccinationVaccines, ConjugatePHiD-CV vaccinePneumococcal VaccinesRNA, Ribosomal, 16SVaccines, Conjugate

Identifiers

PMID26083474
PMCPMC4471099
OpenAlexW1779527535

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.