Evidence map›Paper›PMID 26083242›Full record

ArticlePloS one2015

Genome-Wide Association Study Identifies Novel Pharmacogenomic Loci For Therapeutic Response to Montelukast in Asthma.

Amber Dahlin, Augusto Litonjua, John J Lima, Mayumi Tamari, Michiaki Kubo, Charles G Irvin, Stephen P Peters, Kelan G Tantisira

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 29 citations in OpenAlex.

  1. Trial
  2. Heterogeneity of Treatment Response to Asthma.Advances in experimental medicine and biology · 2023
    Article
  3. Article
  4. Review
  5. How does race and ethnicity effect the precision treatment of asthma?Expert review of precision medicine and drug development · 2019
    Article
  6. Article
  7. Genetic and Epigenetic Components of Aspirin-Exacerbated Respiratory Disease.Immunology and allergy clinics of North America · 2016
    Review
  8. [Research advances in gene polymorphisms in biological pathways of drugs for asthma].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2016
    Review
  9. Review
  10. Antileukotrienes in upper airway inflammatory diseases.Current allergy and asthma reports · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 2 countries.

Amber DahlinChanning Division of Network Medicine, Brigham & Women's Hospital and Harvard Medical School, Boston, MA, United States of America.
Augusto LitonjuaChanning Division of Network Medicine, Brigham & Women's Hospital and Harvard Medical School, Boston, MA, United States of America; Division of Pulmonary and Critical Care Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, United States of America.
John J LimaNemours Children's Clinic, Jacksonville, FL, United States of America.
Mayumi TamariCenter for Integrative Medical Sciences, RIKEN, Yokohama, Japan.
Michiaki KuboCenter for Integrative Medical Sciences, RIKEN, Yokohama, Japan.
Charles G IrvinUniversity of Vermont, Burlington, VT, United States of America.
Stephen P PetersWake Forest School of Medicine, Winston-Salem, NC, United States of America.
Kelan G TantisiraChanning Division of Network Medicine, Brigham & Women's Hospital and Harvard Medical School, Boston, MA, United States of America; Division of Pulmonary and Critical Care Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, United States of America.
Brigham and Women's Hospital · USRIKEN Center for Integrative Medical Sciences · JPHarvard University · USNemours Children’s Clinic · USUniversity of Vermont · USWake Forest University · US

Funding

THE PHARMACOGENETICS OF ASTHMA TREATMENTU01HL065899 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G, WEISS, SCOTT T · 2000 to 2014
$38.5M
SYSTEMS APPROACHES TO THE EPIDEMIOLOGY, GENETICS AND GENOMICS OF LUNG DISEASEST32HL007427 · NHLBI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI DAWN L DEMEO, Edwin K Silverman · 1985 to 2026
$13.6M
INTEGRATIVE PHARMACOGENOMICS OF LEUKOTRIENE INHIBITION IN ASTHMAR01HL092197 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G · 2009 to 2013
$3.6M
PHARMACOGENETICS OF ASTHMA MONOTHERAPYR01HL074755 · NHLBI · NEMOURS CHILDREN'S CLINIC · PI LIMA, JOHN J · 2003 to 2005
$1.6M
GENOMICS AND PHARMACOGENOMICS OF SYMPTOMS IN ASTHMAR01NR013391 · NINR · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G · 2011 to 2013
$1.3M
SLEEP AND ENTRAINMENT OF SCN FUNCTIONR01HL064278 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI STROHL, KINGMAN PERKINS · 1999 to 2002
$871k
LEUKOTRIENE POLYMORPHISMS &MONTELUKAST RESPONSER01HL071394 · NHLBI · NEMOURS CHILDREN'S CLINIC · PI LIMA, JOHN J · 2002 to 2003
$352k
NHLBI NIH HHS HL071394NHLBI NIH HHS HL074755NHLBI NIH HHS N02-HL-6-4278NHLBI NIH HHS R01 HL071394NHLBI NIH HHS R01 HL074755NHLBI NIH HHS R01 HL092197NHLBI NIH HHS R01HL65899NHLBI NIH HHS T32 HL007427NHLBI NIH HHS U01 HL065899NINR NIH HHS R01 NR013391
6 · The paper itself

Abstract

backgroundGenome-wide association study (GWAS) is a powerful tool to identify novel pharmacogenetic single nucleotide polymorphisms (SNPs). Leukotriene receptor antagonists (LTRAs) are a major class of asthma medications, and genetic factors contribute to variable responses to these drugs. We used GWAS to identify novel SNPs associated with the response to the LTRA, montelukast, in asthmatics.

methodsUsing genome-wide genotype and phenotypic data available from American Lung Association - Asthma Clinical Research Center (ALA-ACRC) cohorts, we evaluated 8-week change in FEV1 related to montelukast administration in a discovery population of 133 asthmatics. The top 200 SNPs from the discovery GWAS were then tested in 184 additional samples from two independent cohorts.

resultsTwenty-eight SNP associations from the discovery GWAS were replicated. Of these, rs6475448 achieved genome-wide significance (combined P = 1.97 x 10-09), and subjects from all four studies who were homozygous for rs6475448 showed increased ΔFEV1 from baseline in response to montelukast.

conclusionsThrough GWAS, we identified a novel pharmacogenomic locus related to improved montelukast response in asthmatics.

Indexed as

Genome-Wide Association StudyAcetatesAdultAsthmaCyclopropanesFemaleGenetic LociHumansLungMalePharmacogeneticsPolymorphism, Single NucleotideQuinolinesSulfidesTreatment OutcomeAcetatesCyclopropanesmontelukastQuinolinesSulfides

Identifiers

PMID26083242
PMCPMC4470685
OpenAlexW2099470235

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.