Evidence map›Paper›PMID 26082787›Full record

ArticleFrontiers in plant science2015

Expression of wild-type PtrIAA14.1, a poplar Aux/IAA gene causes morphological changes in Arabidopsis.

Shanda Liu, Qingnan Hu, Sha Luo, Qianqian Li, Xiyu Yang, Xianling Wang, Shucai Wang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 52 citations in OpenAlex.

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  9. CRISPR/Cas9 Gene Editing ofInternational journal of molecular sciences · 2022
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  10. Genome-Wide Analysis of AP2/ERF Gene Superfamily in Ramie (International journal of molecular sciences · 2022
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  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Aux/IAA and ARF Gene Families inFrontiers in plant science · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Shanda LiuKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University , Changchun, China.
Qingnan HuKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University , Changchun, China.
Sha LuoKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University , Changchun, China.
Qianqian LiKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University , Changchun, China.
Xiyu YangKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University , Changchun, China.
Xianling WangKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University , Changchun, China.
Shucai WangKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University , Changchun, China.
Northeast Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aux/IAA proteins are transcriptional repressors that control auxin signaling by interacting with auxin response factors (ARFs). So far all of the identified Aux/IAA mutants with auxin-related phenotypes in Arabidopsis and rice (Oryza sativa) are dominant gain-of-function mutants, with mutations in Domain II that affected stability of the corresponding Aux/IAA proteins. On the other hand, morphological changes were observed in knock-down mutants of Aux/IAA genes in tomato (Solanum lycopersicum), suggesting that functions of Aux/IAA proteins may be specific for certain plant species. We report here the characterization of PtrIAA14.1, a poplar (Populus trichocarpa) homolog of IAA7. Bioinformatics analysis showed that PtrIAA14.1 is a classic Aux/IAA protein. It contains four conserved domains with the repressor motif in Domain I, the degron in Domain II, and the conserved amino acid signatures for protein-protein interactions in Domain III and Domain IV. Protoplast transfection assays showed that PtrIAA14.1 is localized in nucleus. It is unable in the presence of auxin, and it represses auxin response reporter gene expression. Expression of wild-type PtrIAA14.1 in Arabidopsis resulted in auxin-related phenotypes including down-curling leaves, semi-draft with increased number of branches, and greatly reduced fertility, but expression of the Arabidopsis Aux/IAA genes tested remain largely unchanged in the transgenic plants. Protein-protein interaction assays in yeast and protoplasts showed that PtrIAA14.1 interacted with ARF5, but not other ARFs. Consistent with this observation, vascular patterning was altered in the transgenic plants, and the expression of AtHB8 (Arabidopsis thaliana homeobox gene 8) was reduced in transgenic plants.

Indexed as

ArabidopsisAux/IAAauxin response factorPopulus trichocarpaPtrIAA14.1vascular patterning

Identifiers

PMID26082787
PMCPMC4451736
OpenAlexW1509845134

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.