Evidence map›Paper›PMID 26082401›Full record

ArticlePlant physiology2015

Integrative Comparison of the Role of the PHOSPHATE RESPONSE1 Subfamily in Phosphate Signaling and Homeostasis in Rice.

Meina Guo, Wenyuan Ruan, Changying Li, Fangliang Huang, Ming Zeng, Yingyao Liu, Yanan Yu, Xiaomeng Ding, Yunrong Wu, Zhongchang Wu and 4 more

Abstract readComparative Study
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed.

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29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Meina GuoState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Wenyuan RuanState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Changying LiState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Fangliang HuangState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Ming ZengState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Yingyao LiuState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Yanan YuState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Xiaomeng DingState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Yunrong WuState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Zhongchang WuState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Chuanzao MaoState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Keke YiState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Ping WuState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.).
Xiaorong MoState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China (M.G., W.R., C.L., F.H., M.Z., Y.L., Y.Y., X.D., Y.W., Z.W., C.M., K.Y., P.W., X.M.); andInstitute of Agricultural Resources and Regional Planning, China Academy of Agricultural Sciences, Beijing 100081, China (W.R., K.Y.) xiaorong@zju.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phosphorus (P), an essential macronutrient for all living cells, is indispensable for agricultural production. Although Arabidopsis (Arabidopsis thaliana) PHOSPHATE RESPONSE1 (PHR1) and its orthologs in other species have been shown to function in transcriptional regulation of phosphate (Pi) signaling and Pi homeostasis, an integrative comparison of PHR1-related proteins in rice (Oryza sativa) has not previously been reported. Here, we identified functional redundancy among three PHR1 orthologs in rice (OsPHR1, OsPHR2, and OsPHR3) using phylogenetic and mutation analysis. OsPHR3 in conjunction with OsPHR1 and OsPHR2 function in transcriptional activation of most Pi starvation-induced genes. Loss-of-function mutations in any one of these transcription factors (TFs) impaired root hair growth (primarily root hair elongation). However, these three TFs showed differences in DNA binding affinities and messenger RNA expression patterns in different tissues and growth stages, and transcriptomic analysis revealed differential effects on Pi starvation-induced gene expression of single mutants of the three TFs, indicating some degree of functional diversification. Overexpression of genes encoding any of these TFs resulted in partial constitutive activation of Pi starvation response and led to Pi accumulation in the shoot. Furthermore, unlike OsPHR2-overexpressing lines, which exhibited growth retardation under normal or Pi-deficient conditions, OsPHR3-overexpressing plants exhibited significant tolerance to low-Pi stress but normal growth rates under normal Pi conditions, suggesting that OsPHR3 would be useful for molecular breeding to improve Pi uptake/use efficiency under Pi-deficient conditions. We propose that OsPHR1, OsPHR2, and OsPHR3 form a network and play diverse roles in regulating Pi signaling and homeostasis in rice.

Indexed as

HomeostasisSignal TransductionAmino Acid SequenceBase SequenceGene Expression ProfilingGene Expression Regulation, PlantMutationOligonucleotide Array Sequence AnalysisOryzaPhosphatesPhylogenyPlant ProteinsPlant RootsPlants, Genetically ModifiedPlant ShootsProtein IsoformsPhosphatesPlant ProteinsProtein IsoformsTranscription Factors

Identifiers

PMID26082401
PMCPMC4528768

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.