Evidence map›Paper›PMID 26082035›Full record

ArticleNature communications2015

Identification of mammalian-adapting mutations in the polymerase complex of an avian H5N1 influenza virus.

Andrew S Taft, Makoto Ozawa, Adam Fitch, Jay V Depasse, Peter J Halfmann, Lindsay Hill-Batorski, Masato Hatta, Thomas C Friedrich, Tiago J S Lopes, Eileen A Maher and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 143 citations in OpenAlex.

  1. Article
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  3. Avian influenza overview June-August 2026.EFSA journal. European Food Safety Authority · 2026
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  5. Avian influenza overview March-May 2026.EFSA journal. European Food Safety Authority · 2026
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  9. Avian influenza overview December 2025-February 2026.EFSA journal. European Food Safety Authority · 2026
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  14. Avian influenza overview September-November 2025.EFSA journal. European Food Safety Authority · 2025
    Article
  15. Review
  16. Avian influenza overview June-September 2025.EFSA journal. European Food Safety Authority · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Article

33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Andrew S TaftInfluenza Research Institute, School of Veterinary Medicine, Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53711, USA.
Makoto Ozawa1] Laboratory of Animal Hygiene, Joint Faculty of Veterinary Medicine, Kagoshima University, Kagoshima 890-0065, Japan [2] Transboundary Animal Diseases Center, Joint Faculty of Veterinary Medicine, Kagoshima University, Kagoshima 890-0065, Japan.
Adam FitchUniversity of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261, USA.
Jay V DepasseUniversity of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261, USA.
Peter J HalfmannInfluenza Research Institute, School of Veterinary Medicine, Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53711, USA.
Lindsay Hill-BatorskiInfluenza Research Institute, School of Veterinary Medicine, Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53711, USA.
Masato HattaInfluenza Research Institute, School of Veterinary Medicine, Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53711, USA.
Thomas C Friedrich1] Wisconsin National Primate Research Center, Madison Wisconsin 53715, USA [2] Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison WI 53711, USA.
Tiago J S Lopes1] Influenza Research Institute, School of Veterinary Medicine, Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53711, USA [2] Division of Virology, Department of Microbiology and Immunology and International Research Center for Infectious Diseases, Institute of Medical Science, University of Tokyo, Tokyo 108-8639, Japan.
Eileen A MaherInfluenza Research Institute, School of Veterinary Medicine, Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53711, USA.
Elodie Ghedin1] University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261, USA [2] Department of Biology, New York University, New York, New York 10003, USA.
Catherine A MackenBioinformatics Institute, University of Auckland, Auckland 1010, New Zealand.
Gabriele NeumannInfluenza Research Institute, School of Veterinary Medicine, Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53711, USA.
Yoshihiro Kawaoka1] Influenza Research Institute, School of Veterinary Medicine, Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53711, USA [2] Division of Virology, Department of Microbiology and Immunology and International Research Center for Infectious Diseases, Institute of Medical Science, University of Tokyo, Tokyo 108-8639, Japan [3] Infection-Induced Host Responses Project, Exploratory Research for Advanced Technology, Saitama 332-0012, Japan.
University of Wisconsin–Madison · USUniversity of Pittsburgh · USKagoshima University · JPNational Institute of Infectious Diseases · JPUniversity of Auckland · NZ

Funding

WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
Transmissibility of avian influenza viruses in mammalsR01AI069274 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KAWAOKA, YOSHIHIRO · 2006 to 2016
$5.5M
NIAID NIH HHS R01 AI069274NIAID NIH HHS R01AI069274NIH HHS OD 011106NIH HHS P51 OD011106
6 · The paper itself

Abstract

Avian influenza viruses of the H5N1 subtype pose a serious global health threat due to the high mortality (>60%) associated with the disease caused by these viruses and the lack of protective antibodies to these viruses in the general population. The factors that enable avian H5N1 influenza viruses to replicate in humans are not completely understood. Here we use a high-throughput screening approach to identify novel mutations in the polymerase genes of an avian H5N1 virus that confer efficient polymerase activity in mammalian cells. Several of the identified mutations (which have previously been found in natural isolates) increase viral replication in mammalian cells and virulence in infected mice compared with the wild-type virus. The identification of amino-acid mutations in avian H5N1 influenza virus polymerase complexes that confer increased replication and virulence in mammals is important for the identification of circulating H5N1 viruses with an increased potential to infect humans.

Indexed as

Adaptation, BiologicalAnimalsDogsFemaleGenes, ReporterHigh-Throughput Nucleotide SequencingHigh-Throughput Screening AssaysInfluenza A Virus, H5N1 SubtypeMadin Darby Canine Kidney CellsMice, Inbred BALB CMutationViral ProteinsVirus ReplicationViral Proteins

Identifiers

PMID26082035
PMCPMC4557292
OpenAlexW2268009881

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.