Evidence map›Paper›PMID 26080803›Full record

ArticleBMC systems biology2015

From ERα66 to ERα36: a generic method for validating a prognosis marker of breast tumor progression.

Clémence Chamard-Jovenin, Alain C Jung, Amand Chesnel, Joseph Abecassis, Stéphane Flament, Sonia Ledrappier, Christine Macabre, Taha Boukhobza, Hélène Dumond

Abstract read
In one paragraph

Article in BMC systems biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. The Role of ERα36 in Development and Tumor Malignancy.International journal of molecular sciences · 2020
    Review
  8. Dual Epigenetic Regulation of ERα36 Expression in Breast Cancer Cells.International journal of molecular sciences · 2019
    Article
  9. Clinical and Biological Significance ofInternational journal of molecular sciences · 2019
    Article
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Clémence Chamard-JoveninCNRS-Université de Lorraine, UMR 7039, Centre de Recherche en Automatique de Nancy, BP70239, F-54506, Vandœuvre-lès-Nancy, France. clemence.jovenin@univ-lorraine.fr.
Alain C JungEA 3430, Centre Paul Strauss, 3 rue Porte de l'Hôpital, 67000, Strasbourg, France. ajung@strasbourg.unicancer.fr.
Amand ChesnelCNRS-Université de Lorraine, UMR 7039, Centre de Recherche en Automatique de Nancy, BP70239, F-54506, Vandœuvre-lès-Nancy, France. amand.chesnel@univ-lorraine.fr.
Joseph AbecassisEA 3430, Centre Paul Strauss, 3 rue Porte de l'Hôpital, 67000, Strasbourg, France. jabecassis@strasbourg.unicancer.fr.
Stéphane FlamentCNRS-Université de Lorraine, UMR 7039, Centre de Recherche en Automatique de Nancy, BP70239, F-54506, Vandœuvre-lès-Nancy, France. stephane.flament@univ-lorraine.fr.
Sonia LedrappierEA 3430, Centre Paul Strauss, 3 rue Porte de l'Hôpital, 67000, Strasbourg, France. sledrappier@strasbourg.unicancer.fr.
Christine MacabreEA 3430, Centre Paul Strauss, 3 rue Porte de l'Hôpital, 67000, Strasbourg, France. cmacabre@strasbourg.unicancer.fr.
Taha BoukhobzaCNRS-Université de Lorraine, UMR 7039, Centre de Recherche en Automatique de Nancy, BP70239, F-54506, Vandœuvre-lès-Nancy, France. taha.boukhobza@univ-lorraine.fr.
Hélène DumondCNRS-Université de Lorraine, UMR 7039, Centre de Recherche en Automatique de Nancy, BP70239, F-54506, Vandœuvre-lès-Nancy, France. helene.dumond@univ-lorraine.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEstrogen receptor alpha36 (ERalpha36), a variant of estrogen receptor alpha (ER) is expressed in about half of breast tumors, independently of the [ER+]/[ER-] status. In vitro, ERalpha36 triggers mitogenic non-genomic signaling and migration ability in response to 17beta-estradiol and tamoxifen. In vivo, highly ERalpha36 expressing tumors are of poor outcome especially as [ER+] tumors are submitted to tamoxifen treatment which, in turn, enhances ERalpha36 expression.

resultsOur study aimed to validate ERalpha36 expression as a reliable prognostic factor for cancer progression from an estrogen dependent proliferative tumor toward an estrogen dispensable metastatic disease. In a retrospective study, we tried to decipher underlying mechanisms of cancer progression by using an original modeling of the relationships between ERalpha36, other estrogen and growth factor receptors and metastatic marker expression. Nonlinear correlation analyses and mutual information computations led to characterize a complex network connecting ERalpha36 to either non-genomic estrogen signaling or to metastatic process.

conclusionsThis study identifies ERalpha36 expression level as a relevant classifier which should be taken into account for breast tumors clinical characterization and [ER+] tumor treatment orientation, using a generic approach for the rapid, cheap and relevant evaluation of any candidate gene expression as a predictor of a complex biological process.

Indexed as

Disease ProgressionGenetic VariationBiomarkers, TumorBreast NeoplasmsComputational BiologyEstrogen Receptor alphaGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansNeoplasm MetastasisPrognosisBiomarkers, TumorESR1 protein, humanEstrogen Receptor alpha

Identifiers

PMID26080803
PMCPMC4469423

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.