Evidence map›Paper›PMID 26079994›Full record

ArticleAmerican journal of medical genetics. Part A2015

Targeted gene capture and massively parallel sequencing identify TMC1 as the causative gene in a six-generation Chinese family with autosomal dominant hearing loss.

Xue Gao, Sha-Sha Huang, Yong-Yi Yuan, Guo-Jian Wang, Jin-Cao Xu, Yu-Bin Ji, Ming-Yu Han, Fei Yu, Dong-Yang Kang, Xi Lin and 1 more

Abstract read
In one paragraph

Article in American journal of medical genetics. Part A, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Distinct functions of TMC channels: a comparative overview.Cellular and molecular life sciences : CMLS · 2019
    Review
  5. Article
  6. Mutation spectra and founder effect of TMC1 in patients with non-syndromic deafness in Xiamen area, China.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2018
    Article
  7. Article
  8. A Missense Mutation inBioMed research international · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Xue GaoDepartment of Otorhinolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Sha-Sha HuangDepartment of Otorhinolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Yong-Yi YuanDepartment of Otorhinolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Guo-Jian WangDepartment of Otorhinolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Jin-Cao XuDepartment of Otorhinolaryngology, Second Artillery General Hospital, Beijing, P. R. China.
Yu-Bin JiDepartment of Otorhinolaryngology, Second Artillery General Hospital, Beijing, P. R. China.
Ming-Yu HanDepartment of Otorhinolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Fei YuDepartment of Otorhinolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Dong-Yang KangDepartment of Otorhinolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Xi LinDepartment of Otolaryngology, Emory University School of Medicine, Atlanta, GA.
Pu DaiDepartment of Otorhinolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Chinese PLA General Hospital · CNSecond Artillery General Hospital of Chinese People's Liberation Army · CNEmory University · USHainan Branch of People's Liberation Army General Hospital · CN

Funding

Genetic hearing screening and diagnosis facilitated by using a combined low-costR33DC010476 · NIDCD · EMORY UNIVERSITY · PI LIN, XI · 2010 to 2013
$2.0M
NIDCD NIH HHS R33 DC010476
6 · The paper itself

Abstract

Hereditary nonsyndromic hearing loss is extremely heterogeneous. Mutations in the transmembrane channel-like gene1 (TMC1) are known to cause autosomal dominant and recessive forms of nonsyndromic hearing loss linked to the loci of DFNA36 and DFNB7/11, respectively. We characterized a six-generation Chinese family (5315) with progressive, postlingual autosomal dominant nonsyndromic hearing loss (ADNSHL). By combining targeted capture of 82 known deafness genes, next-generation sequencing and bioinformatic analysis, we identified TMC1 c.1714G>A (p. D572N) as the disease-causing mutation. This mutation co-segregated with hearing loss in other family members and was not detected in 308 normal controls. In order to determine the prevalence of TMC1 c.1714G>A in Chinese ADNSHL families, we used DNA samples from 67 ADNSHL families with sloping audiogram and identified two families carry this mutation. To determine whether it arose from a common ancestor, we analyzed nine STR markers. Our results indicated that TMC1 c.1714G>A (p.D572N) account for about 4.4% (3/68) of ADNSHL in the Chinese population.

Indexed as

MutationAdultAsian PeopleAudiometryBase SequenceCase-Control StudiesChildComputational BiologyDNA Mutational AnalysisFemaleGene ExpressionGenes, DominantGenetic LociGenetic MarkersHearing Loss, SensorineuralHeterozygoteGenetic MarkersMembrane ProteinsTMC1 protein, humanautosomal dominant nonsyndromic hearing lossmassively parallel sequencingtargeted gene captureTMC1

Identifiers

PMID26079994
PMCPMC4567392
OpenAlexW2120075918

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.