Evidence map›Paper›PMID 26079749›Full record

ArticleNeural computation2015

An Empirical Model for Reliable Spiking Activity.

Wanjie Wang, Shreejoy J Tripathy, Krishnan Padmanabhan, Nathaniel N Urban, Robert E Kass

Abstract read
In one paragraph

Article in Neural computation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Computational Neuroscience: Mathematical and Statistical Perspectives.Annual review of statistics and its application · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Wanjie WangDepartment of Statistics, Carnegie Mellon University, Pittsburgh, PA 15213, U.S.A. wanjiew@upenn.edu.
Shreejoy J TripathyCenter for the Neural Basis of Cognition, Carnegie Mellon University, Pittsburgh, PA 15213, U.S.A. stripathy@chibi.ubc.ca.
Krishnan PadmanabhanDepartment of Biology, Carnegie Mellon University, Pittsburgh, PA 15213, U.S.A. krishnan@salk.edu.
Nathaniel N UrbanCenter for the Neural Basis of Cognition and Department of Biology, Carnegie Mellon University, Pittsburgh, PA 15213, U.S.A. nurban@cmu.edu.
Robert E KassDepartment of Statistics, Machine Learning Department, and Center for the Neural Basis of Cognition, Carnegie Mellon University, Pittsburgh, PA 15213, U.S.A. kass@stat.cmu.edu.

Funding

Diversity supplement to Analysis of Nonstationary Point Process DataR01MH064537 · NIMH · CARNEGIE-MELLON UNIVERSITY · PI KASS, ROBERT E · 2001 to 2024
$7.2M
in vivo imaging of transplanted human induced-Pluripotent Stem Cell (iPSC) derived neurons to model neurological and psychiatric disordersR01MH113924 · NIMH · UNIVERSITY OF ROCHESTER · PI PADMANABHAN, KRISHNAN · 2017 to 2021
$2.3M
PHYSIOLOGICAL AND COMPUTATIONAL APPROACHES TO UNDERSTANDING NEURONAL SYNCHRONIZATR01DC011184 · NIDCD · CARNEGIE-MELLON UNIVERSITY · PI URBAN, NATHAN NEAL · 2010 to 2014
$1.5M
ENGRAFTING HUMAN NEURONS INTO ANIMAL MODELS TO STUDY SCHIZOPHRENIAR00MH101634 · NIMH · UNIVERSITY OF ROCHESTER · PI PADMANABHAN, KRISHNAN · 2016 to 2018
$731k
Engrafting human neurons into animal models to study schizophreniaK99MH101634 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI PADMANABHAN, KRISHNAN · 2013 to 2014
$175k
NIDCD NIH HHS R01 DC011184NIMH NIH HHS K99 MH101634NIMH NIH HHS K99MH101634NIMH NIH HHS R00 MH101634NIMH NIH HHS R01 MH064537NIMH NIH HHS R01 MH113924
6 · The paper itself

Abstract

Understanding a neuron's transfer function, which relates a neuron's inputs to its outputs, is essential for understanding the computational role of single neurons. Recently, statistical models, based on point processes and using generalized linear model (GLM) technology, have been widely applied to predict dynamic neuronal transfer functions. However, the standard version of these models fails to capture important features of neural activity, such as responses to stimuli that elicit highly reliable trial-to-trial spiking. Here, we consider a generalization of the usual GLM that incorporates nonlinearity by modeling reliable and nonreliable spikes as being generated by distinct stimulus features. We develop and apply these models to spike trains from olfactory bulb mitral cells recorded in vitro. We find that spike generation in these neurons is better modeled when reliable and unreliable spikes are considered separately and that this effect is most pronounced for neurons with a large number of both reliable and unreliable spikes.

Indexed as

Models, NeurologicalAction PotentialsAnimalsBiophysical PhenomenaComputer SimulationLinear ModelsNeuronsNonlinear DynamicsOlfactory BulbTime Factors

Identifiers

PMID26079749
PMCPMC5450813

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.