Evidence map›Paper›PMID 26077327›Full record

ArticleHuman mutation2015

Nonsyndromic Early-Onset Cone-Rod Dystrophy and Limb-Girdle Muscular Dystrophy in a Consanguineous Israeli Family are Caused by Two Independent yet Linked Mutations in ALMS1 and DYSF.

Csilla H Lazar, Adva Kimchi, Prasanthi Namburi, Mousumi Mutsuddi, Lina Zelinger, Avigail Beryozkin, Shiran Ben-Simhon, Alexey Obolensky, Ziva Ben-Neriah, Zohar Argov and 7 more

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. PrevalentGenes · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Unique phenotypic-genotypic correlation in Saudi patients withSaudi journal of ophthalmology : official journal of the Saudi Ophthalmological Society
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 4 countries.

Csilla H LazarNeurobiology-Neurodegeneration & Repair Laboratory, National Eye Institute, National Institutes of Health, Bethesda, Maryland.
Adva KimchiDepartment of Ophthalmology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Prasanthi NamburiDepartment of Ophthalmology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Mousumi MutsuddiDepartment of Molecular and Human Genetics, Banaras Hindu University, Varanasi, India.
Lina ZelingerNeurobiology-Neurodegeneration & Repair Laboratory, National Eye Institute, National Institutes of Health, Bethesda, Maryland.
Avigail BeryozkinDepartment of Ophthalmology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Shiran Ben-SimhonDepartment of Ophthalmology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Alexey ObolenskyDepartment of Ophthalmology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Ziva Ben-NeriahDepartment of Genetics, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Zohar ArgovDepartment of Neurology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Eli PikarskyDepartment of Pathology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Yakov FelligDepartment of Pathology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Devorah Marks-OhanaDepartment of Ophthalmology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Rinki RatnapriyaNeurobiology-Neurodegeneration & Repair Laboratory, National Eye Institute, National Institutes of Health, Bethesda, Maryland.
Eyal BaninDepartment of Ophthalmology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Dror SharonDepartment of Ophthalmology, Hadassah-Hebrew University Medical Center, Jerusalem, Israel.
Anand SwaroopNeurobiology-Neurodegeneration & Repair Laboratory, National Eye Institute, National Institutes of Health, Bethesda, Maryland.
Hadassah Medical Center · ILHebrew University of Jerusalem · ILNational Eye Institute · USNational Institutes of Health · USBanaras Hindu University · IN

Funding

Mechanisms, modeling and therapies of retinal and macular neurodegenerationZIAEY000546 · NEI · NATIONAL EYE INSTITUTE · PI SWAROOP, ANAND · 2015 to 2025
$36.3M
Retinal aging and inherited neurodegenerative diseasesZIAEY000473 · NEI · NATIONAL EYE INSTITUTE · PI SWAROOP, ANAND · 2009 to 2014
$16.2M
Intramural NIH HHS ZIA EY000473NEI NIH HHS EY000473
6 · The paper itself

Abstract

Genetic analysis of clinical phenotypes in consanguineous families is complicated by coinheritance of large DNA regions carrying independent variants. Here, we characterized a family with early onset cone-rod dystrophy (CRD) and muscular dystrophy. Homozygosity mapping (HM) followed by whole exome sequencing revealed a nonsense mutation, p.R270*, in ALMS1 and two novel potentially disease-causing missense variants, p.R1581C and p.Y2070C, in DYSF. ALMS1 and DYSF are genetically and physically linked on chromosome 2 in a genomic region suggested by HM and associated with Alström syndrome, which includes CRD, and with limb girdle muscular dystrophy, respectively. Affected family members lack additional systemic manifestations of Alström syndrome but exhibit mild muscular dystrophy. RNA-seq data did not reveal any significant variations in ALMS1 transcripts in the human retina. Our study thus implicates ALMS1 as a nonsyndromic retinal disease gene and suggests a potential role of variants in interacting cilia genes in modifying clinical phenotypes.

Indexed as

ConsanguinityMutationCell Cycle ProteinsDNA Mutational AnalysisDysferlinFemaleGenetic Association StudiesHumansMaleMembrane ProteinsMuscle ProteinsMuscle, SkeletalMuscular Dystrophies, Limb-GirdlePedigreePhenotypeProteinsALMS1 protein, humanCell Cycle ProteinsDysferlinDYSF protein, humanMembrane ProteinsMuscle ProteinsProteinsALMS1DYSFphotoreceptorpleiotropic phenotypesretinal degenerationvision loss

Identifiers

PMID26077327
PMCPMC4537390
OpenAlexW2130660309

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.