Evidence map›Paper›PMID 26076345›Full record

ArticlePLoS pathogens2015

Discordant Impact of HLA on Viral Replicative Capacity and Disease Progression in Pediatric and Adult HIV Infection.

Emily Adland, Paolo Paioni, Christina Thobakgale, Leana Laker, Luisa Mori, Maximilian Muenchhoff, Anna Csala, Margaret Clapson, Jacquie Flynn, Vas Novelli and 12 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

  1. A SYSTEMATIC REVIEW ON THE INFLUENCE OF HLA-B POLYMORPHISMS ON HIV-1 MOTHER-TO-CHILD-TRANSMISSION.The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases
    Pooled it
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  18. COVID-19 in Immunosuppressed Children.Frontiers in pediatrics · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 10 institutions in 7 countries.

Emily AdlandDepartment of Paediatrics, University of Oxford, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom.
Paolo PaioniDepartment of Paediatrics, University of Oxford, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom.
Christina ThobakgaleHIV Pathogenesis Programme, Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa.
Leana LakerPaediatric Department, Kimberley Hospital, Northern Cape, South Africa.
Luisa MoriPaediatric Department, Kimberley Hospital, Northern Cape, South Africa.
Maximilian MuenchhoffDepartment of Paediatrics, University of Oxford, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom; HIV Pathogenesis Programme, Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa.
Anna CsalaDepartment of Paediatrics, University of Oxford, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom.
Margaret ClapsonDepartment of Paediatric Infectious Diseases, Great Ormond St Hospital for Children, London, United Kingdom.
Jacquie FlynnDepartment of Paediatric Infectious Diseases, Great Ormond St Hospital for Children, London, United Kingdom.
Vas NovelliDepartment of Paediatric Infectious Diseases, Great Ormond St Hospital for Children, London, United Kingdom.
Jacob HurstThe Institute for Emerging Infections, The Oxford Martin School, University of Oxford, Oxford, United Kingdom; Nuffield Department of Medicine, University of Oxford, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom; Oxford National Institute of Health Research, Biomedical Research Centre, Oxford, United Kingdom.
Vanessa NaidooHIV Pathogenesis Programme, Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa.
Roger ShapiroBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Kuan-Hsiang Gary HuangThe Institute for Emerging Infections, The Oxford Martin School, University of Oxford, Oxford, United Kingdom; Nuffield Department of Medicine, University of Oxford, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom.
John FraterThe Institute for Emerging Infections, The Oxford Martin School, University of Oxford, Oxford, United Kingdom; Nuffield Department of Medicine, University of Oxford, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom; Oxford National Institute of Health Research, Biomedical Research Centre, Oxford, United Kingdom.
Andrew PrendergastCentre for Paediatrics, Blizard Institute, Queen Mary University of London, London, United Kingdom; Zvitambo Institute for Maternal and Child Health Research, Harare, Zimbabwe.
Julia G PradoAIDS Research Institute IrsiCaixa, Institut d'Investigació en Ciències de la Salut Germans Trias i Pujol, Badalona, Barcelona, Spain.
Thumbi Ndung'uHIV Pathogenesis Programme, Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa; The Ragon Institute of Massachusetts General Hospital (MGH), Massachusetts Institute of Technology (MIT), and Harvard University, Boston, Massachusetts, United States of America; KwaZulu-Natal Research Institute for Tuberculosis and HIV, University of KwaZulu-Natal, Durban, South Africa; Max Planck Institute for Infection Biology, Berlin, Germany.
Bruce D WalkerHIV Pathogenesis Programme, Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa; The Ragon Institute of Massachusetts General Hospital (MGH), Massachusetts Institute of Technology (MIT), and Harvard University, Boston, Massachusetts, United States of America.
Mary CarringtonThe Ragon Institute of Massachusetts General Hospital (MGH), Massachusetts Institute of Technology (MIT), and Harvard University, Boston, Massachusetts, United States of America; Center for Cancer Research, National Cancer Institute, Frederick, Maryland, United States of America.
Pieter JoostePaediatric Department, Kimberley Hospital, Northern Cape, South Africa.
Philip J R GoulderDepartment of Paediatrics, University of Oxford, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom; HIV Pathogenesis Programme, Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa; Department of Paediatric Infectious Diseases, Great Ormond St Hospital for Children, London, United Kingdom.
Medawar Building for Pathogen Research · GBUniversity of KwaZulu-Natal · ZAKimberley Hospital · ZAUniversity College London · GBBotswana Harvard AIDS Institute Partnership · BWFrederick National Laboratory for Cancer Research · USGreat Ormond Street Hospital · GBIrsiCaixa · ESMax Planck Institute for Infection Biology · DEQueen Mary University of London · GB

Funding

Effects of genetic polymorphism in MHC, KIR, and related loci on human diseaseZIABC010791 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI CARRINGTON, MARY N. · 2009 to 2025
$18.2M
Optimizing CD8+ T-cell responses against C clade HIV infection in subSaharan AfriR01AI046995 · NIAID · UNIVERSITY OF OXFORD · PI GOULDER, PHILIP J · 2000 to 2014
$6.8M
Howard Hughes Medical InstituteMedical Research Council G0500384Medical Research Council MR/L006588/1NIAID NIH HHS R01 AI046995Wellcome Trust 104748Wellcome Trust WT104748MA
6 · The paper itself

Abstract

HLA class I polymorphism has a major influence on adult HIV disease progression. An important mechanism mediating this effect is the impact on viral replicative capacity (VRC) of the escape mutations selected in response to HLA-restricted CD8+ T-cell responses. Factors that contribute to slow progression in pediatric HIV infection are less well understood. We here investigate the relationship between VRC and disease progression in pediatric infection, and the effect of HLA on VRC and on disease outcome in adult and pediatric infection. Studying a South African cohort of >350 ART-naïve, HIV-infected children and their mothers, we first observed that pediatric disease progression is significantly correlated with VRC. As expected, VRCs in mother-child pairs were strongly correlated (p = 0.004). The impact of the protective HLA alleles, HLA-B*57, HLA-B*58:01 and HLA-B*81:01, resulted in significantly lower VRCs in adults (p<0.0001), but not in children. Similarly, in adults, but not in children, VRCs were significantly higher in subjects expressing the disease-susceptible alleles HLA-B*18:01/45:01/58:02 (p = 0.007). Irrespective of the subject, VRCs were strongly correlated with the number of Gag CD8+ T-cell escape mutants driven by HLA-B*57/58:01/81:01 present in each virus (p = 0.0002). In contrast to the impact of VRC common to progression in adults and children, the HLA effects on disease outcome, that are substantial in adults, are small and statistically insignificant in infected children. These data further highlight the important role that VRC plays both in adult and pediatric progression, and demonstrate that HLA-independent factors, yet to be fully defined, are predominantly responsible for pediatric non-progression.

Indexed as

AdultChildCohort StudiesDisease ProgressionHIV-1HIV InfectionsHLA AntigensHumansPolymerase Chain ReactionVirus ReplicationHLA Antigens

Identifiers

PMID26076345
PMCPMC4468173
OpenAlexW2156096572

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.