Evidence map›Paper›PMID 26075887›Full record

ArticlePloS one2015

Modulation of PICALM Levels Perturbs Cellular Cholesterol Homeostasis.

Jacob L Mercer, Joseph P Argus, Donna M Crabtree, Melissa M Keenan, Moses Q Wilks, Jen-Tsan Ashley Chi, Steven J Bensinger, Catherine P Lavau, Daniel S Wechsler

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Cell type-specific functions of Alzheimer's disease endocytic risk genes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  6. Towards a Unitary Hypothesis of Alzheimer's Disease Pathogenesis.Journal of Alzheimer's disease : JAD · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jacob L MercerDepartment of Pharmacology & Cancer Biology, Duke University, Durham, North Carolina, United States of America.
Joseph P ArgusDepartment of Microbiology, Immunology and Molecular Genetics, Molecular and Medical Pharmacology, University of California Los Angeles, Los Angeles, California, United States of America.
Donna M CrabtreeDepartment of Pediatrics, Division of Pediatric Hematology-Oncology, Duke University, Durham, North Carolina, United States of America.
Melissa M KeenanDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, United States of America; Center for Genomic and Computational Biology, Duke University, Durham, North Carolina, United States of America.
Moses Q WilksDepartment of Radiology, Center for Advanced Medical Imaging Sciences, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Jen-Tsan Ashley ChiDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, United States of America; Center for Genomic and Computational Biology, Duke University, Durham, North Carolina, United States of America.
Steven J BensingerDepartment of Microbiology, Immunology and Molecular Genetics, Molecular and Medical Pharmacology, University of California Los Angeles, Los Angeles, California, United States of America.
Catherine P LavauDepartment of Pediatrics, Division of Pediatric Hematology-Oncology, Duke University, Durham, North Carolina, United States of America.
Daniel S WechslerDepartment of Pharmacology & Cancer Biology, Duke University, Durham, North Carolina, United States of America; Department of Pediatrics, Division of Pediatric Hematology-Oncology, Duke University, Durham, North Carolina, United States of America.
Duke University · USUniversity of California, Los Angeles · USMassachusetts General Hospital · US

Funding

ORGANIZATION AND FUNCTIONS OF CELLULAR STRUCTUREST32GM007184 · NIGMS · DUKE UNIVERSITY · PI JINKS-ROBERTSON, SUE · 1985 to 2019
$18.2M
Genetics Training Grant-Year 26T32GM007754 · NIGMS · DUKE UNIVERSITY · PI HAASE, STEVEN B · 1985 to 2019
$8.3M
Determining the Impact of SREBP on Adaptive ImmunityR01AI093768 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BENSINGER, STEVEN J · 2012 to 2015
$1.5M
NIAID NIH HHS AI093768NIAID NIH HHS R01 AI093768NIGMS NIH HHS T32 GM007184NIGMS NIH HHS T32 GM007754NIGMS NIH HHS T32 GM008469
6 · The paper itself

Abstract

PICALM (Phosphatidyl Inositol Clathrin Assembly Lymphoid Myeloid protein) is a ubiquitously expressed protein that plays a role in clathrin-mediated endocytosis. PICALM also affects the internalization and trafficking of SNAREs and modulates macroautophagy. Chromosomal translocations that result in the fusion of PICALM to heterologous proteins cause leukemias, and genome-wide association studies have linked PICALM Single Nucleotide Polymorphisms (SNPs) to Alzheimer's disease. To obtain insight into the biological role of PICALM, we performed gene expression studies of PICALM-deficient and PICALM-expressing cells. Pathway analysis demonstrated that PICALM expression influences the expression of genes that encode proteins involved in cholesterol biosynthesis and lipoprotein uptake. Gas Chromatography-Mass Spectrometry (GC-MS) studies indicated that loss of PICALM increases cellular cholesterol pool size. Isotopic labeling studies revealed that loss of PICALM alters increased net scavenging of cholesterol. Flow cytometry analyses confirmed that internalization of the LDL receptor is enhanced in PICALM-deficient cells as a result of higher levels of LDLR expression. These findings suggest that PICALM is required for cellular cholesterol homeostasis and point to a novel mechanism by which PICALM alterations may contribute to disease.

Indexed as

HomeostasisAnimalsBiosynthetic PathwaysCell LineCholesterolGene ExpressionGene Knockout TechniquesHumansMiceMonomeric Clathrin Assembly ProteinsOrgan SpecificityProtein TransportReceptors, LDLRNA InterferenceRNA, Small InterferingCholesterolMonomeric Clathrin Assembly ProteinsPICALM protein, humanPICALM protein, mouseReceptors, LDLRNA, Small Interfering

Identifiers

PMID26075887
PMCPMC4467867
OpenAlexW1548216896

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.