Evidence map›Paper›PMID 26074947›Full record

ArticleFrontiers in plant science2015

Molecular characterization of SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) gene family from Citrus and the effect of fruit load on their expression.

Liron Shalom, Lyudmila Shlizerman, Naftali Zur, Adi Doron-Faigenboim, Eduardo Blumwald, Avi Sadka

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
8.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. TheGenes · 2023
    Article
  6. Article
  7. Review
  8. Review
  9. International journal of molecular sciences · 2022
    Article
  10. Article
  11. Hierarchical Action of Mulberry miR156 in the Vegetative Phase Transition.International journal of molecular sciences · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. The Role ofInternational journal of molecular sciences · 2019
    Article
  17. Article
  18. Article
  19. Constitutive Expression ofInternational journal of molecular sciences · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Liron ShalomDepartment of Fruit Tree Sciences, Agricultural Research Organization, The Volcani Center Bet Dagan, Israel ; The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem Rehovot, Israel.
Lyudmila ShlizermanDepartment of Fruit Tree Sciences, Agricultural Research Organization, The Volcani Center Bet Dagan, Israel.
Naftali ZurDepartment of Fruit Tree Sciences, Agricultural Research Organization, The Volcani Center Bet Dagan, Israel.
Adi Doron-FaigenboimDepartment of Fruit Tree Sciences, Agricultural Research Organization, The Volcani Center Bet Dagan, Israel.
Eduardo BlumwaldDepartment of Plant Sciences, University of California, Davis Davis, CA, USA.
Avi SadkaDepartment of Fruit Tree Sciences, Agricultural Research Organization, The Volcani Center Bet Dagan, Israel.
Agricultural Research Organization · ILHebrew University of Jerusalem · ILUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We recently identified a Citrus gene encoding SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) transcription factor that contained a sequence complementary to miR156. Genes of the SPL family are known to play a role in flowering regulation and phase transition. In Citrus, the mRNA levels of the gene were significantly altered by fruit load in buds; under heavy fruit load (ON-Crop trees), known to suppress next year flowering, the mRNA levels were down-regulated, while fruit removal (de-fruiting), inducing next-year flowering, resulted in its up-regulation. In the current work, we set on to study the function of the gene. We showed that the Citrus SPL was able promote flowering independently of photoperiod in Arabidopsis, while miR156 repressed its flowering-promoting activity. In order to find out if fruit load affected the expression of additional genes of the SPL family, we identified and classified all SPL members in the Citrus genome, and studied their seasonal expression patterns in buds and leaves, and in response to de-fruiting. Results showed that two additional SPL-like genes and miR172, known to be induced by SPLs in Arabidopsis, were altered by fruit load. The relationships between these factors in relation to the fruit-load effect on Citrus flowering are discussed.

Indexed as

alternate bearingCitrusfloweringmiR156miR172SPL

Identifiers

PMID26074947
PMCPMC4443640
OpenAlexW2163888674

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.