ReviewFrontiers in microbiology2015
Strategies and approaches in plasmidome studies-uncovering plasmid diversity disregarding of linear elements?
Review in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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Who cites it
27 citing papers in PubMed.
- Non-Thermal Plasma-Mediated Redox Signaling and Microbiome Interactions for Abiotic Stress Adaptation: Molecular Insights and Future Prospects for Sustainable Agriculture.International journal of molecular sciences · 2026Review
- Plasmids as persistent genetic reservoirs of bacterial defense systems in wastewater treatment.Microbiome · 2026Article
- Clinical and Environmental Plasmids: Antibiotic Resistance, Virulence, Mobility, and ESKAPEE Pathogens.Antibiotics (Basel, Switzerland) · 2025Article
- Challenges and considerations for whole-genome-based antimicrobial resistance plasmid investigations.Antimicrobial agents and chemotherapy · 2025Review
- Antibiotics and Antibiotic Resistance Genes in the Environment: Dissemination, Ecological Risks, and Remediation Approaches.Microorganisms · 2025Review
- Evidence ofApplied and environmental microbiology · 2025Article
- The influence of depth on the global deep-sea plasmidome.Scientific reports · 2025Article
- Plasma Optimization as a Novel Tool to Explore Plant-Microbe Interactions in Climate Smart Agriculture.Microorganisms · 2025Review
- Article
- Effect of a probiotic and an antibiotic on the mobilome of the porcine microbiota.Frontiers in genetics · 2024Article
- PLASMe: a tool to identify PLASMid contigs from short-read assemblies using transformer.Nucleic acids research · 2023Article
- Multilayer networks of plasmid genetic similarity reveal potential pathways of gene transmission.The ISME journal · 2023Article
- Metagenomic analysis reveals gut plasmids as diagnosis markers for colorectal cancer.Frontiers in microbiology · 2023Article
- Plasmid-Mediated Transfer of Antibiotic Resistance Genes in Soil.Antibiotics (Basel, Switzerland) · 2022Review
- Assessment of the plasmidome of an extremophilic microbial community from the Diamante Lake, Argentina.Scientific reports · 2021Article
- RFPlasmid: predicting plasmid sequences from short-read assembly data using machine learning.Microbial genomics · 2021Article
- Occurrence and plasmid profiles of multidrug-resistantBiotechnologia · 2021Article
- Article
- Exploring Phytochemicals for Combating Antibiotic Resistance in Microbial Pathogens.Frontiers in pharmacology · 2021Review
- Experimental approaches to tracking mobile genetic elements in microbial communities.FEMS microbiology reviews · 2020Review
Corrections and comments
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Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The term plasmid was originally coined for circular, extrachromosomal genetic elements. Today, plasmids are widely recognized not only as important factors facilitating genome restructuring but also as vehicles for the dissemination of beneficial characters within bacterial communities. Plasmid diversity has been uncovered by means of culture-dependent or -independent approaches, such as endogenous or exogenous plasmid isolation as well as PCR-based detection or transposon-aided capture, respectively. High-throughput-sequencing made possible to cover total plasmid populations in a given environment, i.e., the plasmidome, and allowed to address the quality and significance of self-replicating genetic elements. Since such efforts were and still are rather restricted to circular molecules, here we put equal emphasis on the linear plasmids which-despite their frequent occurrence in a large number of bacteria-are largely neglected in prevalent plasmidome conceptions.
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