Evidence map›Paper›PMID 26074702›Full record

ArticleWorld journal of gastroenterology2015

Precore/basal core promoter mutants quantification throughout phases of hepatitis B virus infection by Simpleprobe.

Wen-Hui Tu, Ying Lv, Yong-Mei Zhang, Wei Hou, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao and 1 more

Open access · hybridAbstract readMulticenter Study
In one paragraph

Article in World journal of gastroenterology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Wen-Hui TuWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Ying LvWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Yong-Mei ZhangWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Wei HouWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Jin-Yu WangWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Yi-Jun ZhangWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Hong-Yan LiuWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Hao-Xiang ZhuWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Yan-Li QinWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Ri-Cheng MaoWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
Ji-Ming ZhangWen-Hui Tu, Ying Lv, Yong-Mei Zhang, Jin-Yu Wang, Yi-Jun Zhang, Hong-Yan Liu, Hao-Xiang Zhu, Yan-Li Qin, Ri-Cheng Mao, Ji-Ming Zhang, Department of Infectious Disease, Huashan Hospital, Fudan University, Shanghai 200040, China.
CAE (Canada) · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo investigate precore/basal core promoter (PC/BCP) mutants throughout hepatitis B virus (HBV) infection and to determine their relationship to hepatitis B early antigen (HBeAg) titers.

methodsWe enrolled 191 patients in various stages of HBV infection at the Huashan Hospital and the Taizhou Municipal Hospital from 2010 to 2012. None of the patients received antiviral therapy. HBV DNA from serum, was quantified by real-time PCR. The HBV genotype was determined by direct sequencing of the S gene. We used the Simpleprobe ultrasensitive quantitative method to detect PC/BCP mutants in each patient. We compared the strain number, percentage, and the changes in PC/BCP mutants in different phases, and analyzed the relationship between PC/BCP mutants and HBeAg by multiple linear regression and logistic regression.

resultsPatients with HBV infection (n = 191) were assigned to groups by phase: Immune tolerance (IT) = 55, Immune clearance (IC) = 67, Low-replicative (LR) = 49, and HBeAg-negative hepatitis (ENH) = 20. Of the patients (male, 112; female, 79) enrolled, 122 were HBeAg-positive and 69 were HBeAg-negative. The median age was 33 years (range: 18-78 years). PC and BCP mutation detection rates were 84.82% (162/191) and 96.86% (185/191), respectively. In five HBeAg-negative cases, we detected double mutation G1896A/G1899A. The logarithm value of PC mutant quantities (log10 PC) significantly differed in IT, IC, and LR phases, as well as in the ENH phase (F = 49.350, P < 0.001). The logarithm value of BCP mutant quantities (log10 BCP) also differed during the four phases (F = 25.530, P < 0.001). Log10 PC and log10 BCP values were high in the IT and IC phases, decreased in the LR phase, and increased in the ENH phase, although the absolute value at this point remained lower than that in the IT and IC phases. PC mutant quantity per total viral load (PC%) and BCP mutant quantity per total viral load (BCP%) differed between phases (F = 20.040, P < 0.001; F = 10.830, P < 0.001), with PC% and BCP% gradually increasing in successive phases. HBeAg titers negatively correlated with PC% (Spearman's rho = -0.354, P < 0.001) and BCP% (Spearman's rho = -0.395, P < 0.001). The negative correlation between PC% and HBeAg status was significant (B = -5.281, P = 0.001), but there was no such correlation between BCP% and HBeAg status (B = -0.523, P = 0.552).

conclusionPC/BCP mutants become predominant in a dynamic and continuous process. Log10 PC, log10 BCP, PC% and BCP% might be combined to evaluate disease progression. PC% determines HBeAg status.

Indexed as

MutationAdolescentAdultAgedBiomarkersChinaDisease ProgressionDNA Mutational AnalysisDNA, ViralFemaleGenotypeHepatitis BHepatitis B Core AntigensHepatitis B e AntigensHepatitis B virusHumansBiomarkersDNA, ViralHepatitis B Core AntigensHepatitis B e AntigensViral Core ProteinsBasal core promoter mutantHepatitis B early antigen titersHepatitis B virusPrecore mutantQuantification

Identifiers

PMID26074702
PMCPMC4458774
OpenAlexW618559379

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.