Evidence map›Paper›PMID 26073046›Full record

ArticleMolecular ecology2015

Three-dimensional post-glacial expansion and diversification of an exploited oceanic fish.

Peter Shum, Christophe Pampoulie, Kristján Kristinsson, Stefano Mariani

Abstract read
In one paragraph

Article in Molecular ecology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
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  7. Article
  8. Geographic extent of introgression inEvolutionary applications · 2017
    Article
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  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Peter ShumEcosystems and Environment Research Centre, School of Environment and Life Sciences, University of Salford, Salford, M5 4WT, UK.
Christophe PampoulieMarine Research Institute, Skúlagata 4, 101 Reykjavík, Iceland.
Kristján KristinssonMarine Research Institute, Skúlagata 4, 101 Reykjavík, Iceland.
Stefano MarianiEcosystems and Environment Research Centre, School of Environment and Life Sciences, University of Salford, Salford, M5 4WT, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vertical divergence in marine organisms is being increasingly documented, yet much remains to be carried out to understand the role of depth in the context of phylogeographic reconstruction and the identification of management units. An ideal study system to address this issue is the beaked redfish, Sebastes mentella - one of four species of 'redfish' occurring in the North Atlantic - which is known for a widely distributed 'shallow-pelagic' oceanic type inhabiting waters between 250 and 550 m, and a more localized 'deep-pelagic' population dwelling between 550 and 800 m, in the oceanic habitat of the Irminger Sea. Here, we investigate the extent of population structure in relation to both depth and geographic spread of oceanic beaked redfish throughout most of its distribution range. By sequencing the mitochondrial control region of 261 redfish collected over a decadal interval, and combining 160 rhodopsin coding nuclear sequences and previously genotyped microsatellite data, we map the existence of two strongly divergent evolutionary lineages with significantly different distribution patterns and historical demography, and whose genetic variance is mostly explained by depth. Combined genetic data, analysed via independent approaches, are consistent with a Late Pleistocene lineage split, where segregation by depth probably resulted from the interplay of climatic and oceanographic processes with life history and behavioural traits. The ongoing process of diversification in North Atlantic S. mentella may serve as an 'hourglass' to understand speciation and adaptive radiation in Sebastes and in other marine taxa distributed across a depth gradient.

Indexed as

Genetic SpeciationGenetics, PopulationAnimalsAtlantic OceanBayes TheoremCell NucleusDNA, MitochondrialGenetic MarkersGenetic VariationGenotypeHaplotypesMicrosatellite RepeatsModels, GeneticMolecular Sequence DataPerciformesPhylogeographyDNA, MitochondrialGenetic Markersapproximate Bayesian computationdepthpopulation divergenceredfishSebastesspeciation

Identifiers

PMID26073046
PMCPMC4744735

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.