Evidence map›Paper›PMID 26073017›Full record

ArticleDevelopmental cell2015

Atypical Transcriptional Activation by TCF via a Zic Transcription Factor in C. elegans Neuronal Precursors.

Sabrina Murgan, Willi Kari, Ute Rothbächer, Magali Iché-Torres, Pauline Mélénec, Oliver Hobert, Vincent Bertrand

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Temporal neuronal differentiation programs safeguard neuronal diversity.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Ascidian gene regulation and bioadhesion.Genesis (New York, N.Y. : 2000) · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
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  15. Article
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  17. Article
  18. Review
  19. Article
  20. A Positive Feed-Forward Loop between LncRNA-CYTOR and Wnt/β-Catenin Signaling Promotes Metastasis of Colon Cancer.Molecular therapy : the journal of the American Society of Gene Therapy · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Sabrina MurganAix-Marseille Université, CNRS, Institut de Biologie du Développement de Marseille, 13288 Marseille Cedex 9, France.
Willi KariAix-Marseille Université, CNRS, Institut de Biologie du Développement de Marseille, 13288 Marseille Cedex 9, France.
Ute RothbächerAix-Marseille Université, CNRS, Institut de Biologie du Développement de Marseille, 13288 Marseille Cedex 9, France.
Magali Iché-TorresAix-Marseille Université, CNRS, Institut de Biologie du Développement de Marseille, 13288 Marseille Cedex 9, France.
Pauline MélénecAix-Marseille Université, CNRS, Institut de Biologie du Développement de Marseille, 13288 Marseille Cedex 9, France.
Oliver HobertDepartment of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, Columbia University Medical Center, New York, NY 10032, USA. Electronic address: or38@columbia.edu.
Vincent BertrandAix-Marseille Université, CNRS, Institut de Biologie du Développement de Marseille, 13288 Marseille Cedex 9, France; Department of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, Columbia University Medical Center, New York, NY 10032, USA. Electronic address: vincent.bertrand@univ-amu.fr.
Centre National de la Recherche Scientifique · FRHoward Hughes Medical Institute · US

Funding

LIM HOMEOBOX GENE LIM-6 IN MOTOR NEURON DIFFERENTIATIONR01NS039996 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Oliver Hobert · 2001 to 2026
$6.8M
Genetic analysis of dopaminergic neuron specification in C.elegansR01NS050266 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HOBERT, OLIVER · 2004 to 2013
$3.4M
Howard Hughes Medical InstituteNINDS NIH HHS R01 NS039996NINDS NIH HHS R01NS039996-05NINDS NIH HHS R01 NS050266NINDS NIH HHS R01NS050266-03
6 · The paper itself

Abstract

Transcription factors of the TCF family are key mediators of the Wnt/β-catenin pathway. TCF usually activates transcription on cis-regulatory elements containing TCF binding sites when the pathway is active and represses transcription when the pathway is inactive. However, some direct targets display an opposite regulation (activated by TCF in the absence of Wnt), but the mechanism behind this atypical regulation remains poorly characterized. Here, we use the cis-regulatory region of an opposite target gene, ttx-3, to dissect the mechanism of this atypical regulation. Using a combination of genetic, molecular, and biochemical experiments, we establish that, in the absence of Wnt pathway activation, TCF activates ttx-3 expression via a Zic binding site by forming a complex with a Zic transcription factor. This mechanism is later reinforced by specific bHLH factors. This study reveals an atypical mode of action for TCF that may apply to other binary decisions mediated by Wnt signaling.

Indexed as

AnimalsAnimals, Genetically ModifiedBasic Helix-Loop-Helix ProteinsBody PatterningCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA-Binding ProteinsHigh Mobility Group ProteinsHomeodomain ProteinsModels, NeurologicalNeural Stem CellsNeuropeptidesTCF Transcription FactorsTranscriptional ActivationTranscription FactorsWnt Signaling PathwayBasic Helix-Loop-Helix ProteinsCaenorhabditis elegans ProteinsDNA-Binding ProteinsHigh Mobility Group ProteinsHLH-3 protein, C elegansHomeodomain ProteinsNeuropeptidespop-1 protein, C elegansREF-2 protein, C elegansSys-1 protein, C elegansTCF Transcription FactorsTranscription FactorsTTX-3 protein, C elegans

Identifiers

PMID26073017
PMCPMC4480195
OpenAlexW1486920424

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.